RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 C9orf170A2RU37 121 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 IL3RAP26951 378 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 RAB32Q13637 225 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 RPUSD3Q6P087 351 aaKnown RBP12.68□□□□□ -0.38
SCARB2-208ENST00000638372 IL34Q6ZMJ4 242 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 CRIPAKQ8N1N5 446 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 CISD2Q8N5K1 135 aaKnown RBP12.68□□□□□ -0.38
SCARB2-208ENST00000638372 OR10X1Q8NGY0 326 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 RNF133Q8WVZ7 376 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 USB1Q9BQ65 265 aaKnown RBP12.68□□□□□ -0.38
SCARB2-208ENST00000638372 KPTNQ9Y664 436 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 UMAD1C9J7I0 102 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 HPP00738 406 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 NGFP01138 241 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 LSM6P62312 80 aaKnown RBP12.68□□□□□ -0.38
SCARB2-208ENST00000638372 MED30Q96HR3 178 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 PRRX2Q99811 253 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 SPAARA0A1B0GVQ0 90 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 C17orf51A8MQB3 221 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 ADRB1P08588 477 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 ASAH2BP0C7U1 165 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 CSF2RBP32927 897 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 MMP16P51512 607 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 PMP22Q01453 160 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 JMJD6Q6NYC1 403 aaPredicted RBP12.68□□□□□ -0.38
SCARB2-208ENST00000638372 OR5AP2Q8NGF4 316 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 C19orf12Q9NSK7 152 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 PSENENQ9NZ42 101 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 DSPPQ9NZW4 1301 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 SMIM10L1P0DMW3 83 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 CHRNB4P30926 498 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 COL13A1Q5TAT6 717 aaPredicted RBP12.68□□□□□ -0.38
SCARB2-208ENST00000638372 EDARADDQ8WWZ3 215 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 SMIM10Q96HG1 83 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 AMELYQ99218 206 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 MED9Q9NWA0 146 aa12.68□□□□□ -0.38
SCARB2-208ENST00000638372 RCL1Q9Y2P8 373 aaKnown RBP12.68□□□□□ -0.38
SCARB2-208ENST00000638372 COL6A6A6NMZ7 2263 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 CLEC18AA5D8T8 446 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 ONECUT2O95948 504 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 SLC38A6Q8IZM9 456 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 C1orf87Q8N0U7 546 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 CLEC18CQ8NCF0 446 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 ADAT3Q96EY9 351 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-208ENST00000638372 GDF15Q99988 308 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 BDP1A6H8Y1 2624 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 DEFB108AA8MXU0 73 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 NGFRP08138 427 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 CRYBA2P53672 197 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 ZXDAP98168 799 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 VWCEQ96DN2 955 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 MDFIC2A0A1B0GVS7 189 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 LIFP15018 202 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 HLXQ14774 488 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-208ENST00000638372 PPP1R3EQ9H7J1 279 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 ZNF71Q9NQZ8 489 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-208ENST00000638372 STRAPQ9Y3F4 350 aaKnown RBP12.67□□□□□ -0.38
SCARB2-208ENST00000638372 ZNF891A8MT65 544 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-208ENST00000638372 IGHV3-13P01766 116 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 IGHV3-7P01780 117 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-208ENST00000638372 TSPO2Q5TGU0 170 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 RXFP4Q8TDU9 374 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 ERGIC1Q969X5 290 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 CLDN23Q96B33 292 aa12.67□□□□□ -0.38
SCARB2-208ENST00000638372 PINX1Q96BK5 328 aaKnown RBP12.67□□□□□ -0.38
SCARB2-208ENST00000638372 GREB1Q4ZG55 1949 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 A0A0J9YW62 118 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 ABCD4O14678 606 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 MPC2O95563 127 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 PDGFBP01127 241 aaPredicted RBP12.66□□□□□ -0.38
SCARB2-208ENST00000638372 CRYABP02511 175 aaKnown RBP12.66□□□□□ -0.38
SCARB2-208ENST00000638372 RGPD3A6NKT7 1758 aaPredicted RBP12.66□□□□□ -0.38
SCARB2-208ENST00000638372 OTOFQ9HC10 1997 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 MASP2O00187 686 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 TSPAN2O60636 221 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 MGST1P10620 155 aaKnown RBP12.66□□□□□ -0.38
SCARB2-208ENST00000638372 GSK3AP49840 483 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 AANATQ16613 207 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 PLPPR5Q32ZL2 321 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 RPUSD4Q96CM3 377 aaKnown RBP12.66□□□□□ -0.38
SCARB2-208ENST00000638372 GPR87Q9BY21 358 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 GAB2Q9UQC2 676 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 SFT2D2O95562 160 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 MT-ND4LP03901 98 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 VSIG8P0DPA2 414 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 DCAF10Q5QP82 559 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 CPEB3Q8NE35 698 aaKnown RBP12.66□□□□□ -0.38
SCARB2-208ENST00000638372 C2CD4CQ8TF44 421 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 COMMD5Q9GZQ3 224 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 TMEM74BQ9NUR3 256 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 NDRG3Q9UGV2 375 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 DOCK8Q8NF50 2099 aa12.66□□□□□ -0.38
SCARB2-208ENST00000638372 TMEM30CPA0ZSE6 113 aa12.65□□□□□ -0.38
SCARB2-208ENST00000638372 DUS4LO95620 317 aaKnown RBP12.65□□□□□ -0.38
SCARB2-208ENST00000638372 SSTP61278 116 aa12.65□□□□□ -0.38
SCARB2-208ENST00000638372 DHODHQ02127 395 aa12.65□□□□□ -0.38
SCARB2-208ENST00000638372 SPICQ8N5J4 248 aa12.65□□□□□ -0.38
SCARB2-208ENST00000638372 ZBTB44Q8NCP5 570 aa12.65□□□□□ -0.38
SCARB2-208ENST00000638372 FBLIM1Q8WUP2 373 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms