RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 C7orf50Q9BRJ6 194 aaKnown RBP13.09□□□□□ -0.31
CLN6-219ENST00000637329 CXXC4Q9H2H0 198 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 OR51I2Q9H344 312 aa13.09□□□□□ -0.31
CLN6-219ENST00000637329 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLN6-219ENST00000637329 MYEF2Q9P2K5 600 aaKnown RBP13.09□□□□□ -0.31
CLN6-219ENST00000637329 A0A0A6YYD4 124 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 IGKV1-12A0A0C4DH73 117 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 DPRXA6NFQ7 191 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 FOXI3A8MTJ6 420 aaPredicted RBP13.08□□□□□ -0.32
CLN6-219ENST00000637329 ANGPTL7O43827 346 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 PLATP00750 562 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 IGKV1D-12P01611 117 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 LPLP06858 475 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 MELTFP08582 738 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 HIST1H1DP16402 221 aaKnown RBP13.08□□□□□ -0.32
CLN6-219ENST00000637329 PRSS3P35030 304 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 UQCRFS1P47985 274 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 VEGFCP49767 419 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 ACTBP60709 375 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 ACTG1P63261 375 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 ALKBH6Q3KRA9 238 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 LINC00596Q86U02 117 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 OSR2Q8N2R0 312 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 PIAS4Q8N2W9 510 aaPredicted RBP13.08□□□□□ -0.32
CLN6-219ENST00000637329 OR10K1Q8NGX5 313 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 MRPL24Q96A35 216 aaKnown RBP13.08□□□□□ -0.32
CLN6-219ENST00000637329 RAB3CQ96E17 227 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 GAL3ST1Q99999 423 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 SELENOIQ9C0D9 397 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 PLK3Q9H4B4 646 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 BANF2Q9H503 90 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 CA10Q9NS85 328 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 TAS2R8Q9NYW2 309 aa13.08□□□□□ -0.32
CLN6-219ENST00000637329 ZNF107Q9UII5 783 aaPredicted RBP13.08□□□□□ -0.32
CLN6-219ENST00000637329 ABCA12Q86UK0 2595 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 RTTNQ86VV8 2226 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 A0A1W2PP11 408 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 PLSCR5A0PG75 271 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 TRAPPC2LH3BP13 241 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 MLNRO43193 412 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 TPD52L2O43399 206 aaKnown RBP13.07□□□□□ -0.32
CLN6-219ENST00000637329 CA11O75493 328 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 HTR3BO95264 441 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 CLDN14O95500 239 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 ACAA1P09110 424 aaPredicted RBP13.07□□□□□ -0.32
CLN6-219ENST00000637329 GSTT2BP0CG30 244 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 GDNFP39905 211 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 RBM11P57052 281 aaKnown RBP13.07□□□□□ -0.32
CLN6-219ENST00000637329 DYRK1AQ13627 763 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 PNLIPRP3Q17RR3 467 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 MOGAT2Q3SYC2 334 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 ZNF260Q3ZCT1 412 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 BEX5Q5H9J7 111 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 ZNF57Q68EA5 555 aaPredicted RBP13.07□□□□□ -0.32
CLN6-219ENST00000637329 MZT2BQ6NZ67 158 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 SLC22A25Q6T423 547 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 DCDC5Q6ZRR9 648 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 CENPSQ8N2Z9 138 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 TOMM5Q8N4H5 51 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 OR51T1Q8NGJ9 327 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 OR52I2Q8NH67 350 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 NICN1Q9BSH3 213 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 TLNRD1Q9H1K6 362 aa13.07□□□□□ -0.32
CLN6-219ENST00000637329 SERPINE3A8MV23 424 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 VSTM5A8MXK1 200 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 H3BUI4 141 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 H7C417 338 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 MFNGO00587 321 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 LANCL1O43813 399 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 PTBP3O95758 552 aaKnown RBP13.06□□□□□ -0.32
CLN6-219ENST00000637329 CSF1P09603 554 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 CD3GP09693 182 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 CD200P41217 278 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 FGF12P61328 243 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 ZNF154Q13106 437 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 MSMPQ1L6U9 139 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 HAGHLQ6PII5 290 aaPredicted RBP13.06□□□□□ -0.32
CLN6-219ENST00000637329 Q6ZR03 302 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 Q6ZTK2 550 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 WDR86Q86TI4 376 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 CELF2-AS1Q8N7Q2 184 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 GPX8Q8TED1 209 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 ITLN2Q8WWU7 325 aaPredicted RBP13.06□□□□□ -0.32
CLN6-219ENST00000637329 SLAMF9Q96A28 289 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 COX4I2Q96KJ9 171 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 MTFP1Q9UDX5 166 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 HSF4Q9ULV5 492 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 FZR1Q9UM11 496 aa13.06□□□□□ -0.32
CLN6-219ENST00000637329 ANKRD20A5PA0PJZ0 165 aa13.05□□□□□ -0.32
CLN6-219ENST00000637329 TUBAL3A6NHL2 446 aa13.05□□□□□ -0.32
CLN6-219ENST00000637329 CENPXA8MT69 81 aa13.05□□□□□ -0.32
CLN6-219ENST00000637329 PLA2G10O15496 165 aa13.05□□□□□ -0.32
CLN6-219ENST00000637329 LYRM1O43325 122 aa13.05□□□□□ -0.32
CLN6-219ENST00000637329 ORC5O43913 435 aa13.05□□□□□ -0.32
CLN6-219ENST00000637329 RBBP9O75884 186 aa13.05□□□□□ -0.32
CLN6-219ENST00000637329 CD3EP07766 207 aa13.05□□□□□ -0.32
CLN6-219ENST00000637329 SFTPBP07988 381 aa13.05□□□□□ -0.32
CLN6-219ENST00000637329 KLF9Q13886 244 aaPredicted RBP13.05□□□□□ -0.32
CLN6-219ENST00000637329 CDSNQ15517 529 aa13.05□□□□□ -0.32
CLN6-219ENST00000637329 CDNFQ49AH0 187 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms