RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 HYAL1Q12794 435 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 ICAM4Q14773 271 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 ANKRD55Q3KP44 614 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 EIPR1Q53HC9 387 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 METRNLQ641Q3 311 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 OR4A47Q6IF82 309 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 Q6ZVH6 145 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 NIT1Q86X76 327 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 ZNF784Q8NCA9 323 aaPredicted RBP6.04□□□□□ -1.44
SCN1A-213ENST00000636759 OR4D5Q8NGN0 318 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 DNASE2BQ8WZ79 361 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 ZNF775Q96BV0 537 aaPredicted RBP6.04□□□□□ -1.44
SCN1A-213ENST00000636759 ZG16BQ96DA0 208 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 BTF3L4Q96K17 158 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 IMMP2LQ96T52 175 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 SAMD10Q9BYL1 202 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 C20orf141Q9NUB4 165 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 SLC45A2Q9UMX9 530 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 SNRNP200O75643 2136 aaKnown RBP6.04□□□□□ -1.44
SCN1A-213ENST00000636759 VSTM2BA6NLU5 285 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 M0R296 226 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 DDAH2O95865 285 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 CKMP06732 381 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 JMJD7P0C870 316 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 HOXB2P14652 356 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 SERPINA4P29622 427 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 VASPP50552 380 aaPredicted RBP6.04□□□□□ -1.44
SCN1A-213ENST00000636759 ZNF266Q14584 549 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 TDRG1Q3Y452 100 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 KLHL24Q6TFL4 600 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 HOGA1Q86XE5 327 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 OR52R1Q8NGF1 315 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 ADAMTS15Q8TE58 950 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 FAM46BQ96A09 425 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 TNFRSF13CQ96RJ3 184 aa6.04□□□□□ -1.44
SCN1A-213ENST00000636759 LSM7Q9UK45 103 aaKnown RBP6.04□□□□□ -1.44
SCN1A-213ENST00000636759 HEATR5BQ9P2D3 2071 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 A0A1W2PRS3 328 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 DCDC2BA2VCK2 349 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 ATXN7O15265 892 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-213ENST00000636759 PSG1P11464 419 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 GLRA1P23415 457 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 GNB2P62879 340 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 PAFAH1B2P68402 229 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 SPATA45Q537H7 98 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 TMEM184AQ6ZMB5 413 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 ZNF550Q7Z398 422 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 TMEM156Q8N614 296 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 ZNF48Q96MX3 618 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-213ENST00000636759 NUDT16L1Q9BRJ7 211 aaKnown RBP6.03□□□□□ -1.44
SCN1A-213ENST00000636759 ULBP3Q9BZM4 244 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 GNG13Q9P2W3 67 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 CCL26Q9Y258 94 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 IER3IP1Q9Y5U9 82 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 A0A1W2PRU2 124 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 FAM166BA8MTA8 275 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 OR7C2O60412 319 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 C8AP07357 584 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 POU2F2P09086 479 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 ATP1B2P14415 290 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-213ENST00000636759 HIST1H1CP16403 213 aaKnown RBP6.03□□□□□ -1.44
SCN1A-213ENST00000636759 CD33P20138 364 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 PTGER1P34995 402 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 VIPR2P41587 438 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 SPINT3P49223 89 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 TBPL1P62380 186 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 GPR157Q5UAW9 335 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 OR4C11Q6IEV9 310 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 TPRG1Q6ZUI0 275 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 C16orf82Q7Z2V1 217 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 SPRED2Q7Z698 418 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 ZNF761Q86XN6 746 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-213ENST00000636759 CMTM8Q8IZV2 173 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 LILRA3Q8N6C8 439 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-213ENST00000636759 NPEPL1Q8NDH3 523 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 RCBTB1Q8NDN9 531 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 OR10AC1Q8NH08 325 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 FGGYQ96C11 551 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 TIFAQ96CG3 184 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 STARD4Q96DR4 205 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 HSPB9Q9BQS6 159 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 ABHD14AQ9BUJ0 271 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 ALG12Q9BV10 488 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 NUDT9Q9BW91 350 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 EHFQ9NZC4 300 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 FLRT3Q9NZU0 649 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 FRRS1LQ9P0K9 344 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 TRBV5-7A0A0A0MS05 114 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 FAM221AA4D161 298 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 ZFP92A6NM28 416 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 FIGNL2A6NMB9 653 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 NUDT21O43809 227 aaKnown RBP6.03□□□□□ -1.44
SCN1A-213ENST00000636759 THY1P04216 161 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 GNRHRP30968 328 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 CSNK1A1P48729 337 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 GGTLC2Q14390 218 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 TMEM176BQ3YBM2 270 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-213ENST00000636759 KCNIP4Q6PIL6 250 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 ABHD12BQ7Z5M8 362 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-213ENST00000636759 WFDC8Q8IUA0 241 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms