RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 PHF1O43189 567 aaPredicted RBP12.9□□□□□ -0.34
CLN6-211ENST00000635754 ACAA1P09110 424 aaPredicted RBP12.9□□□□□ -0.34
CLN6-211ENST00000635754 ZFP36P26651 326 aaKnown RBP12.9□□□□□ -0.34
CLN6-211ENST00000635754 MAPK3P27361 379 aaPredicted RBP12.9□□□□□ -0.34
CLN6-211ENST00000635754 MLLT11Q13015 90 aaPredicted RBP12.9□□□□□ -0.34
CLN6-211ENST00000635754 GPR50Q13585 617 aa12.9□□□□□ -0.34
CLN6-211ENST00000635754 ZNF529Q6P280 563 aa12.9□□□□□ -0.34
CLN6-211ENST00000635754 ACP7Q6ZNF0 438 aa12.9□□□□□ -0.34
CLN6-211ENST00000635754 ZNF367Q7RTV3 350 aa12.9□□□□□ -0.34
CLN6-211ENST00000635754 SVOPQ8N4V2 548 aa12.9□□□□□ -0.34
CLN6-211ENST00000635754 SLAMF9Q96A28 289 aa12.9□□□□□ -0.34
CLN6-211ENST00000635754 RFT1Q96AA3 541 aa12.9□□□□□ -0.34
CLN6-211ENST00000635754 CEP19Q96LK0 163 aa12.9□□□□□ -0.34
CLN6-211ENST00000635754 MGLLQ99685 303 aa12.9□□□□□ -0.34
CLN6-211ENST00000635754 TMED9Q9BVK6 235 aa12.9□□□□□ -0.34
CLN6-211ENST00000635754 ACOT13Q9NPJ3 140 aa12.9□□□□□ -0.34
CLN6-211ENST00000635754 KAAG1Q9UBP8 84 aa12.9□□□□□ -0.34
CLN6-211ENST00000635754 CTSZQ9UBR2 303 aa12.9□□□□□ -0.34
CLN6-211ENST00000635754 POLR3KQ9Y2Y1 108 aaPredicted RBP12.9□□□□□ -0.34
CLN6-211ENST00000635754 PPIAL4CA0A0B4J2A2 164 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 A0A0G2JMP0 313 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 A0A0X1KG70 313 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 KIAA1324LA8MWY0 1029 aaPredicted RBP12.89□□□□□ -0.35
CLN6-211ENST00000635754 TRAPPC2LH3BP13 241 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 SPRY1O43609 319 aaPredicted RBP12.89□□□□□ -0.35
CLN6-211ENST00000635754 FSTP19883 344 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 GATA3P23771 443 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 PDZK1IP1Q13113 114 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 KISS1Q15726 138 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 CR1LQ2VPA4 569 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 ATPAF1Q5TC12 328 aaPredicted RBP12.89□□□□□ -0.35
CLN6-211ENST00000635754 DCAF12L2Q5VW00 463 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 LIPKQ5VXJ0 399 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 WDR25Q64LD2 544 aaPredicted RBP12.89□□□□□ -0.35
CLN6-211ENST00000635754 ASPHD2Q6ICH7 369 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 ZNF841Q6ZN19 808 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 Q8IYB0 196 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 BATF2Q8N1L9 274 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 OR4M2Q8NGB6 313 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 OR51A2Q8NGJ7 313 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 ANGPTL6Q8NI99 470 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 DERL3Q96Q80 235 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 CCL13Q99616 98 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 HES4Q9HCC6 221 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 MTCH1Q9NZJ7 389 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 SETD2Q9BYW2 2564 aaPredicted RBP12.89□□□□□ -0.35
CLN6-211ENST00000635754 FN1P02751 2386 aaKnown RBP12.89□□□□□ -0.35
CLN6-211ENST00000635754 ARHGAP32A7KAX9 2087 aa12.89□□□□□ -0.35
CLN6-211ENST00000635754 NIPBLQ6KC79 2804 aaeCLIP12.89□□□□□ -0.35
CLN6-211ENST00000635754 TRBV5-7A0A0A0MS05 114 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 INMTO95050 263 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 HNF1AP20823 631 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 ERVK11-1P61568 191 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 IL13RA1P78552 427 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 EMX1Q04741 257 aaPredicted RBP12.88□□□□□ -0.35
CLN6-211ENST00000635754 TPBGQ13641 420 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 FAHD2BQ6P2I3 314 aaPredicted RBP12.88□□□□□ -0.35
CLN6-211ENST00000635754 FAM216BQ8N7L0 139 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 OR5D18Q8NGL1 313 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 ZDHHC16Q969W1 377 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 ORAI1Q96D31 301 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 FAHD2AQ96GK7 314 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 MED30Q96HR3 178 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 GPER1Q99527 375 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 SHARPINQ9H0F6 387 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 TMEM138Q9NPI0 162 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 LPAR3Q9UBY5 353 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 CDC42EP3Q9UKI2 254 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 LRRC42Q9Y546 428 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 WNK2Q9Y3S1 2297 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 IGKV1D-17A0A075B6S4 117 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 A0A1W2PPK0 400 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 J3QLI3 93 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 DVL1O14640 695 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 NDUFB3O43676 98 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 GPX5O75715 221 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 ALDOBP05062 364 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 PSG2P11465 335 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 CPEP16870 476 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 IGFBP3P17936 291 aaPredicted RBP12.88□□□□□ -0.35
CLN6-211ENST00000635754 BDKRB2P30411 391 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 TGFBR2P37173 567 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 GABRA2P47869 451 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 KCTD21Q4G0X4 260 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 ACSM3Q53FZ2 586 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 LRRC10Q5BKY1 277 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 FAM120AOSQ5T036 256 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 DDI2Q5TDH0 399 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 CD276Q5ZPR3 534 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 FIP1L1Q6UN15 594 aaKnown RBP12.88□□□□□ -0.35
CLN6-211ENST00000635754 ZNF788Q6ZQV5 615 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 SATL1Q86VE3 508 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 SAXO1Q8IYX7 474 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 SPARTQ8N0X7 666 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 OR52N4Q8NGI2 321 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 EMG1Q92979 244 aaKnown RBP12.88□□□□□ -0.35
CLN6-211ENST00000635754 GAFA1Q96PS6 74 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 SMURF1Q9HCE7 757 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 FOXJ3Q9UPW0 622 aa12.88□□□□□ -0.35
CLN6-211ENST00000635754 LOC105371242A0A075B767 164 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms