RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 CRTAPO75718 401 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 MPIG6BO95866 241 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 IGKV1D-12P01611 117 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 RAC2P15153 192 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 BTCP35070 178 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 ZNF83P51522 516 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 CEACAM21Q3KPI0 293 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 ALKBH6Q3KRA9 238 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 SHEQ5VZ18 495 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 OR2T2Q6IF00 324 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 ALKBH2Q6NS38 261 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 MZT2BQ6NZ67 158 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 CALHM1Q8IU99 346 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 TOMM5Q8N4H5 51 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 SLC25A40Q8TBP6 338 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 DVL3Q92997 716 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 METTL9Q9H1A3 318 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 BEX4Q9NWD9 120 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 KLK11Q9UBX7 282 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 MPC1Q9Y5U8 109 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 PQLC2LA1A4F0 135 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 FOXI3A8MTJ6 420 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 M0R1B8 84 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 LCE2BO14633 110 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 LYRM1O43325 122 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 ORC5O43913 435 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 ZNF780AO75290 641 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 CHRM2P08172 466 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 SELEP16581 610 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 SERPINA2P20848 420 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 GDNFP39905 211 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 VEGFCP49767 419 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 NAAAQ02083 359 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 GUCA2AQ02747 115 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 KLF9Q13886 244 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 GPR176Q14439 515 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 MSMPQ1L6U9 139 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 ASCL4Q6XD76 172 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 OR5A2Q8NGI9 324 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 OR10K1Q8NGX5 313 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 ITPKCQ96DU7 683 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 MARS2Q96GW9 593 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 C18orf12Q96KH6 178 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 GSX1Q9H4S2 264 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 BANF2Q9H503 90 aa8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 RBFOX1Q9NWB1 397 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 MRPL15Q9P015 296 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-223ENST00000627587 ANKHD1Q8IWZ3 2542 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 CHD3Q12873 2000 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 CENPXA8MT69 81 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 SPRY1O43609 319 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 ANGPTL7O43827 346 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 ECDO95905 644 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 PLATP00750 562 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 CRYAAP02489 173 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 CSTBP04080 98 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 GSTT2BP0CG30 244 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 MGMTP16455 207 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 PRSS3P35030 304 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 MPV17P39210 176 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 TMEM50BP56557 158 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 AP3S2P59780 193 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 PSG7Q13046 419 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 PDZK1IP1Q13113 114 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 RSU1Q15404 277 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 CCBE1Q6UXH8 406 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 SSX8Q7RTT4 187 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 GLCCI1Q86VQ1 547 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 FAM89BQ8N5H3 189 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 CHST4Q8NCG5 386 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 PXT1Q8NFP0 134 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 OR56B1Q8NGI3 324 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 OR10R2Q8NGX6 335 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 ENKURQ8TC29 256 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 KLF14Q8TD94 323 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 RNF170Q96K19 258 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 NUDT16L1Q9BRJ7 211 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 OR10A4Q9H209 315 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 ZMAT3Q9HA38 289 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 PCDHB16Q9NRJ7 776 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 FAIMQ9NVQ4 179 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 ZNF581Q9P0T4 197 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 KCNK7Q9Y2U2 307 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 SPEF1Q9Y4P9 236 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 MAP1AP78559 2803 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 PLCE1Q9P212 2302 aa8.1□□□□□ -1.11
PDLIM5-223ENST00000627587 OR5B21A6NL26 309 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 IQCF6A8MYZ5 107 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 SULT1C2O00338 296 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 SOCS1O15524 211 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 RBBP9O75884 186 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 GTF2F2P13984 249 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 CA6P23280 308 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 CPT2P23786 658 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 GCH1P30793 250 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 GPM6AP51674 278 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 RPS27AP62979 156 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 DYRK1AQ13627 763 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 SNTB1Q13884 538 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 ZNF718Q3SXZ3 478 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms