RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 ZNF714Q96N38 554 aa11.72□□□□□ -0.53
PNKP-218ENST00000625299 GPR84Q9NQS5 396 aa11.72□□□□□ -0.53
PNKP-218ENST00000625299 SLC22A13Q9Y226 551 aa11.72□□□□□ -0.53
PNKP-218ENST00000625299 POLDIP2Q9Y2S7 368 aa11.72□□□□□ -0.53
PNKP-218ENST00000625299 MINOS1-NBL1R4GNA1 71 aa11.72□□□□□ -0.53
PNKP-218ENST00000625299 IGHV2-26A0A0B4J1V2 119 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 FAM90A22PA8MWA6 464 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 K7N7A8 449 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 PSMD9O00233 223 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 RBP4P02753 201 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 NHLRC4P0CG21 123 aaPredicted RBP11.71□□□□□ -0.53
PNKP-218ENST00000625299 H2AFXP16104 143 aaPredicted RBP11.71□□□□□ -0.53
PNKP-218ENST00000625299 LMO1P25800 156 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 IL18R1Q13478 541 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 UNQ9370/PRO34162Q6UXP9 181 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 ETV3LQ6ZN32 361 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 ASRGL1Q7L266 308 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 C16orf82Q7Z2V1 217 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 TRPM8Q7Z2W7 1104 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 ZNF573Q86YE8 665 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 OR51E1Q8TCB6 317 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 TFAP2CQ92754 450 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 STMN2Q93045 179 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 CMTM5Q96DZ9 223 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 NRIP2Q9BQI9 281 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 SLC25A33Q9BSK2 321 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 GPR173Q9NS66 373 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 ENPP5Q9UJA9 477 aa11.71□□□□□ -0.53
PNKP-218ENST00000625299 DYNC2H1Q8NCM8 4307 aaKnown RBP11.71□□□□□ -0.54
PNKP-218ENST00000625299 A0A0U1RQV5 110 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 TMEM269A0A1B0GVZ9 245 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 H3BN98 237 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 C3orf84H3BNL1 204 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 NRASP01111 189 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 HMGA2P52926 109 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 ESRRGP62508 458 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 DGCR2P98153 550 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 KLHL22Q53GT1 634 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 PLBD1Q6P4A8 553 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 TPRX1Q8N7U7 411 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 MCRIP2Q9BUT9 160 aaKnown RBP11.7□□□□□ -0.54
PNKP-218ENST00000625299 PBOV1Q9GZY1 135 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 LIN7BQ9HAP6 207 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 FAM206AQ9NX38 181 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 LAMP5Q9UJQ1 280 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 SESN1Q9Y6P5 492 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 U3KQV3 271 aa11.7□□□□□ -0.54
PNKP-218ENST00000625299 EPPK1P58107 5090 aaKnown RBP11.7□□□□□ -0.54
PNKP-218ENST00000625299 NUDT19A8MXV4 375 aa11.69□□□□□ -0.54
PNKP-218ENST00000625299 PRR23D1E9PI22 279 aaPredicted RBP11.69□□□□□ -0.54
PNKP-218ENST00000625299 NOS1APO75052 506 aaPredicted RBP11.69□□□□□ -0.54
PNKP-218ENST00000625299 INMTO95050 263 aa11.69□□□□□ -0.54
PNKP-218ENST00000625299 PRR23D2P0DMB1 279 aaPredicted RBP11.69□□□□□ -0.54
PNKP-218ENST00000625299 HTR1DP28221 377 aa11.69□□□□□ -0.54
PNKP-218ENST00000625299 BRS3P32247 399 aa11.69□□□□□ -0.54
PNKP-218ENST00000625299 HCCSP53701 268 aa11.69□□□□□ -0.54
PNKP-218ENST00000625299 RPS7P62081 194 aaKnown RBP11.69□□□□□ -0.54
PNKP-218ENST00000625299 C8orf86Q6ZUL3 223 aa11.69□□□□□ -0.54
PNKP-218ENST00000625299 KRT74Q7RTS7 529 aa11.69□□□□□ -0.54
PNKP-218ENST00000625299 TCF23Q7RTU1 214 aa11.69□□□□□ -0.54
PNKP-218ENST00000625299 TEAD3Q99594 435 aa11.69□□□□□ -0.54
PNKP-218ENST00000625299 ASCL2Q99929 193 aa11.69□□□□□ -0.54
PNKP-218ENST00000625299 CLEC7AQ9BXN2 247 aa11.69□□□□□ -0.54
PNKP-218ENST00000625299 TTTY10Q9BZA0 68 aa11.69□□□□□ -0.54
PNKP-218ENST00000625299 TMEM133Q9H2Q1 129 aa11.69□□□□□ -0.54
PNKP-218ENST00000625299 HES4Q9HCC6 221 aa11.69□□□□□ -0.54
PNKP-218ENST00000625299 GTF2A1LQ9UNN4 478 aa11.69□□□□□ -0.54
PNKP-218ENST00000625299 hADV38S2A0JD32 116 aa11.68□□□□□ -0.54
PNKP-218ENST00000625299 PSMB11A5LHX3 300 aa11.68□□□□□ -0.54
PNKP-218ENST00000625299 A6NIN4 97 aa11.68□□□□□ -0.54
PNKP-218ENST00000625299 H0YHG0 523 aa11.68□□□□□ -0.54
PNKP-218ENST00000625299 HSD17B1P14061 328 aa11.68□□□□□ -0.54
PNKP-218ENST00000625299 ATP6V1B1P15313 513 aa11.68□□□□□ -0.54
PNKP-218ENST00000625299 THBS3P49746 956 aa11.68□□□□□ -0.54
PNKP-218ENST00000625299 RAB25P57735 213 aa11.68□□□□□ -0.54
PNKP-218ENST00000625299 C18orf65Q6ZTR6 163 aa11.68□□□□□ -0.54
PNKP-218ENST00000625299 ZNF329Q86UD4 541 aa11.68□□□□□ -0.54
PNKP-218ENST00000625299 ANGPTL5Q86XS5 388 aa11.68□□□□□ -0.54
PNKP-218ENST00000625299 OSR2Q8N2R0 312 aa11.68□□□□□ -0.54
PNKP-218ENST00000625299 OR4P4Q8NGL7 312 aa11.68□□□□□ -0.54
PNKP-218ENST00000625299 NIPSNAP1Q9BPW8 284 aa11.68□□□□□ -0.54
PNKP-218ENST00000625299 DGCR6LQ9BY27 220 aa11.68□□□□□ -0.54
PNKP-218ENST00000625299 VNN3Q9NY84 501 aa11.68□□□□□ -0.54
PNKP-218ENST00000625299 SAMHD1Q9Y3Z3 626 aaKnown RBP11.68□□□□□ -0.54
PNKP-218ENST00000625299 PQLC2LA1A4F0 135 aa11.67□□□□□ -0.54
PNKP-218ENST00000625299 FAM172BPA6NC97 362 aa11.67□□□□□ -0.54
PNKP-218ENST00000625299 ZNF737O75373 536 aa11.67□□□□□ -0.54
PNKP-218ENST00000625299 DHRS3O75911 302 aa11.67□□□□□ -0.54
PNKP-218ENST00000625299 OR2F2O95006 317 aa11.67□□□□□ -0.54
PNKP-218ENST00000625299 ARHGDIBP52566 201 aa11.67□□□□□ -0.54
PNKP-218ENST00000625299 RPL23AP62750 156 aaKnown RBP11.67□□□□□ -0.54
PNKP-218ENST00000625299 MEF2CQ06413 473 aaPredicted RBP11.67□□□□□ -0.54
PNKP-218ENST00000625299 MICAQ29983 383 aa11.67□□□□□ -0.54
PNKP-218ENST00000625299 CLVS2Q5SYC1 327 aa11.67□□□□□ -0.54
PNKP-218ENST00000625299 KCTD18Q6PI47 426 aaPredicted RBP11.67□□□□□ -0.54
PNKP-218ENST00000625299 CYP2R1Q6VVX0 501 aa11.67□□□□□ -0.54
PNKP-218ENST00000625299 ZBTB49Q6ZSB9 765 aa11.67□□□□□ -0.54
PNKP-218ENST00000625299 TRAPPC6BQ86SZ2 158 aa11.67□□□□□ -0.54
PNKP-218ENST00000625299 OR8H2Q8N162 312 aa11.67□□□□□ -0.54
PNKP-218ENST00000625299 TRMT10AQ8TBZ6 339 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms