RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 RELL2Q8NC24 303 aaPredicted RBP18.35■□□□□ 0.53
SPAST-204ENST00000621856 ST8SIA4Q92187 359 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 CYYR1Q96J86 154 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 TINAGL1Q9GZM7 467 aaPredicted RBP18.35■□□□□ 0.53
SPAST-204ENST00000621856 ST3GAL6Q9Y274 331 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 NCOR2Q9Y618 2525 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 TRAPPC2LH3BP13 241 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 GEMIN2O14893 280 aaKnown RBP18.35■□□□□ 0.53
SPAST-204ENST00000621856 ARPC1BO15143 372 aaKnown RBP18.35■□□□□ 0.53
SPAST-204ENST00000621856 AKR7A2O43488 359 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 AMY2AP04746 511 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 TRAPPC2P0DI81 140 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 TRAPPC2BP0DI82 140 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 GCH1P30793 250 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 RBM11P57052 281 aaKnown RBP18.35■□□□□ 0.53
SPAST-204ENST00000621856 MEF2DQ14814 521 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 RBMS2Q15434 407 aaKnown RBP18.35■□□□□ 0.53
SPAST-204ENST00000621856 RNASE10Q5GAN6 216 aaKnown RBP18.35■□□□□ 0.53
SPAST-204ENST00000621856 TMEM200AQ86VY9 491 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 C1orf174Q8IYL3 243 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 DACT3Q96B18 629 aaPredicted RBP18.35■□□□□ 0.53
SPAST-204ENST00000621856 VKORC1Q9BQB6 163 aa18.35■□□□□ 0.53
SPAST-204ENST00000621856 PURGQ9UJV8 347 aaKnown RBP18.35■□□□□ 0.53
SPAST-204ENST00000621856 TLN1Q9Y490 2541 aaKnown RBP18.34■□□□□ 0.53
SPAST-204ENST00000621856 TIMM8AO60220 97 aaPredicted RBP18.34■□□□□ 0.53
SPAST-204ENST00000621856 PEX14O75381 377 aa18.34■□□□□ 0.53
SPAST-204ENST00000621856 OR8G1Q15617 311 aa18.34■□□□□ 0.53
SPAST-204ENST00000621856 GIMAP1Q8WWP7 306 aa18.34■□□□□ 0.53
SPAST-204ENST00000621856 GINS4Q9BRT9 223 aa18.34■□□□□ 0.53
SPAST-204ENST00000621856 BEX2Q9BXY8 128 aa18.34■□□□□ 0.53
SPAST-204ENST00000621856 HEATR1Q9H583 2144 aaKnown RBP18.34■□□□□ 0.53
SPAST-204ENST00000621856 BEX1Q9HBH7 125 aa18.34■□□□□ 0.53
SPAST-204ENST00000621856 FZR1Q9UM11 496 aa18.34■□□□□ 0.53
SPAST-204ENST00000621856 PLEKHA6Q9Y2H5 1048 aa18.34■□□□□ 0.53
SPAST-204ENST00000621856 A0A0A6YYJ9 748 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 DISC1C4P0D8 188 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 C16orf97H3BN30 126 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 SYNGR1O43759 233 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 CRYAAP02489 173 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 CSN2P05814 226 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 SFTPCP11686 197 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 FABP6P51161 128 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 C1QTNF12Q5T7M4 302 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 SIGIRRQ6IA17 410 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 BPIFB2Q8N4F0 458 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 RADILQ96JH8 1075 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 DMRTA2Q96SC8 542 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 OCSTAMPQ9BR26 566 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 TMEM100Q9NV29 134 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 ETAA1Q9NY74 926 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 SPEF1Q9Y4P9 236 aa18.33■□□□□ 0.52
SPAST-204ENST00000621856 ESPL1Q14674 2120 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 BSNQ9UPA5 3926 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 CA11O75493 328 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 CHATP28329 748 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 IGFBP7Q16270 282 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 ST6GALNAC3Q8NDV1 305 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 OR8G5Q8NG78 346 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 USB1Q9BQ65 265 aaKnown RBP18.32■□□□□ 0.52
SPAST-204ENST00000621856 PKIBQ9C010 78 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 OR51I2Q9H344 312 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 MTCH1Q9NZJ7 389 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 JKAMPQ9P055 326 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 ZNF581Q9P0T4 197 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 HSF4Q9ULV5 492 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 ANAPC10Q9UM13 185 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 C7orf66A4D0T2 115 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 J3QT63 122 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 CCKARP32238 428 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 SNU13P55769 128 aaKnown RBP18.32■□□□□ 0.52
SPAST-204ENST00000621856 FGF12P61328 243 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 CBX3Q13185 183 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 NKPD1Q17RQ9 610 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 ELP2Q6IA86 826 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 RGS7BPQ6MZT1 257 aaPredicted RBP18.32■□□□□ 0.52
SPAST-204ENST00000621856 Q8NFD4 153 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 OR4K15Q8NH41 348 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 EMG1Q92979 244 aaKnown RBP18.32■□□□□ 0.52
SPAST-204ENST00000621856 FBXW5Q969U6 566 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 FAAP24Q9BTP7 215 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 SCP2D1Q9UJQ7 156 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 POU2F3Q9UKI9 436 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 MEMO1Q9Y316 297 aa18.32■□□□□ 0.52
SPAST-204ENST00000621856 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.31■□□□□ 0.52
SPAST-204ENST00000621856 MED19A0JLT2 244 aaPredicted RBP18.31■□□□□ 0.52
SPAST-204ENST00000621856 LRP5LA4QPB2 252 aa18.31■□□□□ 0.52
SPAST-204ENST00000621856 A8MV72 311 aaPredicted RBP18.31■□□□□ 0.52
SPAST-204ENST00000621856 NAT1P18440 290 aa18.31■□□□□ 0.52
SPAST-204ENST00000621856 TBPP20226 339 aa18.31■□□□□ 0.52
SPAST-204ENST00000621856 KITLGP21583 273 aa18.31■□□□□ 0.52
SPAST-204ENST00000621856 HRH1P35367 487 aa18.31■□□□□ 0.52
SPAST-204ENST00000621856 RRAS2P62070 204 aaPredicted RBP18.31■□□□□ 0.52
SPAST-204ENST00000621856 MRPS15P82914 257 aaKnown RBP18.31■□□□□ 0.52
SPAST-204ENST00000621856 IL24Q13007 206 aa18.31■□□□□ 0.52
SPAST-204ENST00000621856 SCGB2B2Q4G0G5 96 aa18.31■□□□□ 0.52
SPAST-204ENST00000621856 MBNL2Q5VZF2 373 aaKnown RBP18.31■□□□□ 0.52
SPAST-204ENST00000621856 OR10AD1Q8NGE0 317 aa18.31■□□□□ 0.52
SPAST-204ENST00000621856 SNAPC3Q92966 411 aa18.31■□□□□ 0.52
SPAST-204ENST00000621856 SLC6A7Q99884 636 aa18.31■□□□□ 0.52
SPAST-204ENST00000621856 ST6GALNAC5Q9BVH7 336 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms