RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 OR3A4PP47883 348 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 CDC34P49427 236 aaPredicted RBP9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 AGFG1P52594 562 aaKnown RBP9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 POLR2GP62487 172 aaKnown RBP eCLIP9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 HES1Q14469 280 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 NUFIP2Q7Z417 695 aaKnown RBP9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 MYPOPQ86VE0 399 aaPredicted RBP9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 DYRK2Q92630 601 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 APOBEC3DQ96AK3 386 aaPredicted RBP9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 CA10Q9NS85 328 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 FKBP11Q9NYL4 201 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 RER1O15258 196 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 RRP8O43159 456 aaKnown RBP9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 GPM6AP51674 278 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 ATP6V1FQ16864 119 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 CEACAM16Q2WEN9 425 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 C11orf42Q8N5U0 333 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 OR10G4Q8NGN3 311 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 OR10G9Q8NGN4 311 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 OR10G7Q8NGN6 311 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 ZNF707Q96C28 371 aaPredicted RBP9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 ANAPC16Q96DE5 110 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 EGLN1Q9GZT9 426 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 SLC25A22Q9H936 323 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 FRRS1LQ9P0K9 344 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 CACNG5Q9UF02 275 aa9.5□□□□□ -0.89
CLTCL1-209ENST00000617103 GYPAP02724 150 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 CYC1P08574 325 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 CTLA4P16410 223 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 CXCL2P19875 107 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 LGALS4P56470 323 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 RPS23P62266 143 aaKnown RBP9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 NAAAQ02083 359 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 MYBPHQ13203 477 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 CEBPEQ15744 281 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 PRICKLE4Q2TBC4 344 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 C20orf196Q8IYI0 205 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 MARVELD3Q96A59 401 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 MRPS24Q96EL2 167 aaKnown RBP9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 ANKRD36CQ5JPF3 1778 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 H3BQ15 152 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 SPINK4O60575 86 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 GLB1P16278 677 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 GNG4P50150 75 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 SPCS3P61009 180 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 UBE2V2Q15819 145 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 ZNF141Q15928 474 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 LIAT1Q6ZQX7 453 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 LINC01555Q8NAE3 123 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 FOXB1Q99853 325 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 KCNK15Q9H427 330 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 UBE2ZQ9H832 354 aaPredicted RBP9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 OR5H15A6NDH6 313 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 OR5H1A6NKK0 313 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 OR4C45A6NMZ5 311 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 YIF1AO95070 293 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 SEC11BP0C7V7 166 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 FGF8P55075 233 aaPredicted RBP9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 COX19Q49B96 90 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 NSUN5P2Q63ZY6 315 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 OR1N1Q8NGS0 311 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 ELSPBP1Q96BH3 223 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 POM121L2Q96KW2 1035 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 NRIP2Q9BQI9 281 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 BARX1Q9HBU1 254 aaPredicted RBP9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 MMP17Q9ULZ9 603 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 SLC45A2Q9UMX9 530 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 TMEM30CPA0ZSE6 113 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 ACAA1P09110 424 aaPredicted RBP9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 PRDX4Q13162 271 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 PDCD1Q15116 288 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 DHRS7BQ6IAN0 325 aaPredicted RBP9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 PARM1Q6UWI2 310 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 ALKBH3Q96Q83 286 aaPredicted RBP9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 ANXA10Q9UJ72 324 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 NEU3Q9UQ49 428 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 PCDHGA9Q9Y5G4 932 aaKnown RBP9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 RP1P56715 2156 aa9.49□□□□□ -0.89
CLTCL1-209ENST00000617103 CBR3O75828 277 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 HRASP01112 189 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 ZGLP1P0C6A0 271 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 HLA-GP17693 338 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 CCR5P51681 352 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 GFERP55789 205 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 RPS16P62249 146 aaKnown RBP9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 GNG3P63215 75 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 RPEL1Q2QD12 228 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 PET117Q6UWS5 81 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 Q8IYB0 196 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 OR10X1Q8NGY0 326 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 TRMT61AQ96FX7 289 aaKnown RBP9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 MOGAT1Q96PD6 335 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 OCIAD1Q9NX40 245 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 LRP5O75197 1615 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 OR10J1P30954 320 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 DUSP2Q05923 314 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 OR5I1Q13606 314 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 C21orf62-AS1Q17RA5 79 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 SMIM21Q3B7S5 101 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 FAM209BQ5JX69 171 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms