RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 PRR18Q8N4B5 295 aa12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 BCL2L2Q92843 193 aaPredicted RBP12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 CDCA3Q99618 268 aaPredicted RBP12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 PRSS27Q9BQR3 290 aa12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 EGLN1Q9GZT9 426 aa12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 NECAP2Q9NVZ3 263 aa12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 WASHC3Q9Y3C0 194 aa12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 IGLV3-16A0A075B6K0 115 aa12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 FCN1O00602 326 aa12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 TLX3O43711 291 aaPredicted RBP12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 OPN1LWP04000 364 aa12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 HLA-DOBP13765 273 aa12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 DYNLT3P51808 116 aa12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 CSRP2Q16527 193 aa12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 MED25Q71SY5 747 aa12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 ZNF573Q86YE8 665 aa12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 ATOH7Q8N100 152 aa12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 FAM160A2Q8N612 972 aaPredicted RBP12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 OVCA2Q8WZ82 227 aa12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 ZNF430Q9H8G1 570 aaPredicted RBP12.04□□□□□ -0.48
PPP4R3B-205ENST00000616288 NPIPA3F8WFD2 350 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 DEDDO75618 318 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 OR7C1O76099 320 aaPredicted RBP12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 KLF3P57682 345 aaPredicted RBP12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 POU3F1Q03052 451 aaPredicted RBP12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 BAXQ07812 192 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 RIPPLY2Q5TAB7 128 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 YAF2Q8IY57 180 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 FAM174AQ8TBP5 190 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 MIEN1Q9BRT3 115 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 C5orf66Q9H5L9 145 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 PRTFDC1Q9NRG1 225 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 FOXD3Q9UJU5 478 aaPredicted RBP12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 A0A0A6YYD5 115 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 DUXBA0A1W2PPF3 345 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 H3BML4 177 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 DUSP11O75319 330 aaKnown RBP12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 ECI1P42126 302 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 EIF4EBP2Q13542 120 aaPredicted RBP12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 MSMO1Q15800 293 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 SPANXN5Q5MJ07 72 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 MVB12AQ96EY5 273 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 SRD5A3Q9H8P0 318 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 HSPB1P04792 205 aaKnown RBP12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 CT45A8P0DMV1 189 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 CT45A9P0DMV2 189 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 TSPAN7P41732 249 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 MLC1Q15049 377 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 ANKRD39Q53RE8 183 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 CT45A2Q5DJT8 189 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 CLLU1OSQ5K130 101 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 STPG1Q5TH74 334 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 TEX38Q6PEX7 206 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 SLC38A9Q8NBW4 561 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 OR51H1Q8NH63 302 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 LRIT1Q9P2V4 623 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 CLCF1Q9UBD9 225 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 GPR132Q9UNW8 380 aa12.03□□□□□ -0.48
PPP4R3B-205ENST00000616288 CDC14CA4D256 554 aa12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 ARPC3O15145 178 aa12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 CLDN1O95832 211 aa12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 DTYMKP23919 212 aa12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 PHF19Q5T6S3 580 aa12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 HOGA1Q86XE5 327 aa12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 NRSN1Q8IZ57 195 aa12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 NUDT10Q8NFP7 164 aa12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 OR4N2Q8NGD1 307 aa12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 LMX1AQ8TE12 382 aa12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 LPAR5Q9H1C0 372 aa12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 MGAMO43451 1857 aa12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 TMEM267Q0VDI3 215 aaPredicted RBP12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 ASB5Q8WWX0 329 aa12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 UQCR10Q9UDW1 63 aa12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 C19orf53Q9UNZ5 99 aaPredicted RBP12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 PPIAL4AQ9Y536 164 aa12.02□□□□□ -0.48
PPP4R3B-205ENST00000616288 HSPB6O14558 160 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 HSBP1O75506 76 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 SRP19P09132 144 aaKnown RBP12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 OR1D4P47884 311 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 MTCP1P56278 107 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 CCL20P78556 96 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 TMEM108Q6UXF1 575 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 OR2I1PQ8NGU4 316 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 IL1F10Q8WWZ1 152 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 IRF7Q92985 503 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 ZNF558Q96NG5 402 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 ABHD14AQ9BUJ0 271 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 FLRT3Q9NZU0 649 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 THY1P04216 161 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 PVRP15151 417 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 ZNF154Q13106 437 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 IL13RA2Q14627 380 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 OR52N5Q8NH56 324 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 PTPMT1Q8WUK0 201 aaPredicted RBP12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 ZNF160Q9HCG1 818 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 MYOZ1Q9NP98 299 aaPredicted RBP12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 ZFP30Q9Y2G7 519 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 MTCH2Q9Y6C9 303 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 R4GMQ9 66 aa12.02□□□□□ -0.49
PPP4R3B-205ENST00000616288 SHANK3Q9BYB0 1731 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms