RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 PRAMEF5Q5TYX0 476 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 PRAMEF6Q5VXH4 476 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 TMEM108Q6UXF1 575 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 H2BFWTQ7Z2G1 175 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 LILRB4Q8NHJ6 448 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 CCL17Q92583 94 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 SIGLEC12Q96PQ1 595 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 RTN4RQ9BZR6 473 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 GLRX2Q9NS18 164 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 TREM2Q9NZC2 230 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 CYB5R1Q9UHQ9 305 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 KLF4O43474 513 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 GFRA3O60609 400 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 IGHV3-13P01766 116 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 IGHV3-7P01780 117 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 UMODP07911 640 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 VSIG8P0DPA2 414 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 ST3GAL2Q16842 350 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 MDP1Q86V88 176 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 SKA3Q8IX90 412 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 FDCSPQ8NFU4 85 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 RBMXL1Q96E39 390 aaKnown RBP6.39□□□□□ -1.39
CSDE1-218ENST00000610726 PGLYRP3Q96LB9 341 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 TMEM68Q96MH6 324 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 FAM117AQ9C073 453 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 WDR13Q9H1Z4 485 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 SLC26A1Q9H2B4 701 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 ZMIZ1Q9ULJ6 1067 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 A0A1W2PP11 408 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 B8ZZF3 427 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 GEMIN2O14893 280 aaKnown RBP6.38□□□□□ -1.39
CSDE1-218ENST00000610726 PLA2G10O15496 165 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 LMX1BO60663 402 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 CELA3AP09093 270 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 HBG1P69891 147 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 HBG2P69892 147 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 RHEBQ15382 184 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 MICBQ29980 383 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 OR10V1Q8NGI7 309 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 GPX8Q8TED1 209 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 GALMQ96C23 342 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 SRXN1Q9BYN0 137 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 NARFLQ9H6Q4 476 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 MSL2Q9HCI7 577 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 FAM212BQ9NTI7 297 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-218ENST00000610726 SDHAF2Q9NX18 166 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 ERRFI1Q9UJM3 462 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-218ENST00000610726 DEFB108AA8MXU0 73 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 TMEM229AB2RXF0 380 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 TNFRSF1AP19438 455 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 SCAND1P57086 179 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 KLF3P57682 345 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-218ENST00000610726 NKX6-1P78426 367 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-218ENST00000610726 DHRS2Q13268 280 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 PPP1R1AQ13522 171 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 KRBOX4Q5JUW0 171 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 SPANXN5Q5MJ07 72 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 GLDNQ6ZMI3 551 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-218ENST00000610726 MUC20Q8N307 709 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-218ENST00000610726 OR13C8Q8NGS7 320 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 LRRC29Q8WV35 223 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 ZNRF4Q8WWF5 429 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 GMPPAQ96IJ6 420 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-218ENST00000610726 IMMP1LQ96LU5 166 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 STARD10Q9Y365 291 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 ANAPC1Q9H1A4 1944 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 IGLV3-12A0A075B6K2 115 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 H3BP45 60 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 SLC6A1P30531 599 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 CALCRP30988 508 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 PPT1P50897 306 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 RPS4XP62701 263 aaKnown RBP6.38□□□□□ -1.39
CSDE1-218ENST00000610726 AKR1C1Q04828 323 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 C19orf57Q0VDD7 668 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF674Q2M3X9 581 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 BHLHA15Q7RTS1 189 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-218ENST00000610726 FAM122BQ7Z309 247 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 CDH26Q8IXH8 852 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 NFAM1Q8NET5 270 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-218ENST00000610726 SLC25A40Q8TBP6 338 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 TMED6Q8WW62 240 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 MAP6Q96JE9 813 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 MARVELD1Q9BSK0 173 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 GSX2Q9BZM3 304 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 OR2J1Q9GZK6 312 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 PRSS50Q9UI38 385 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 MPC1Q9Y5U8 109 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 LHFPL6Q9Y693 200 aa6.38□□□□□ -1.39
CSDE1-218ENST00000610726 TRAV39A0A0B4J263 110 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 ANKRD20A5PA0PJZ0 165 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 OR5B21A6NL26 309 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 C9orf172C9J069 976 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 MT-CO2P00403 227 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 GABRA4P48169 554 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 LIMK1P53667 647 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 BAXQ07812 192 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF528Q3MIS6 628 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 SLC25A47Q6Q0C1 308 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 FAM214BQ7L5A3 538 aa6.37□□□□□ -1.39
CSDE1-218ENST00000610726 NLRC3Q7RTR2 1065 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms