RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 DMRTB1Q96MA1 342 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 ZNF488Q96MN9 340 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 NRIP2Q9BQI9 281 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 DCTN5Q9BTE1 182 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 MRPS18AQ9NVS2 196 aaKnown RBP11.07□□□□□ -0.64
SENP3-209ENST00000610454 CHCHD3Q9NX63 227 aaKnown RBP11.07□□□□□ -0.64
SENP3-209ENST00000610454 OR14J1Q9UGF5 321 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 DNAJC9-AS1A6NH13 148 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 TMEM212A6NML5 194 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 FCN3O75636 299 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 CLIC3O95833 236 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 MMP9P14780 707 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 AMY2BP19961 511 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 DCKP27707 260 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 UBA52P62987 128 aaKnown RBP11.06□□□□□ -0.64
SENP3-209ENST00000610454 IL18R1Q13478 541 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 SMN1Q16637 294 aaKnown RBP11.06□□□□□ -0.64
SENP3-209ENST00000610454 C12orf54Q6X4T0 127 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 LHFPL2Q6ZUX7 228 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 CALHM1Q8IU99 346 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 Q8IYB0 196 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 BATF2Q8N1L9 274 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 ZNRF1Q8ND25 227 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 DNAAF1Q8NEP3 725 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 OR5AK2Q8NH90 309 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 CNIH3Q8TBE1 160 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 TSEN15Q8WW01 171 aaKnown RBP11.06□□□□□ -0.64
SENP3-209ENST00000610454 SLC25A28Q96A46 364 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 ADAT3Q96EY9 351 aaPredicted RBP11.06□□□□□ -0.64
SENP3-209ENST00000610454 SDSLQ96GA7 329 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 CEP19Q96LK0 163 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 TBX15Q96SF7 602 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 SIRPDQ9H106 197 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 DCLRE1BQ9H816 532 aa11.06□□□□□ -0.64
SENP3-209ENST00000610454 ISG20L2Q9H9L3 353 aaKnown RBP11.06□□□□□ -0.64
SENP3-209ENST00000610454 DNHD1Q96M86 4753 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 TRBV23-1A0A0A0MS06 115 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 TRBV2A0A0J9YWF9 115 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 A0A1W2PPH5 198 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 OR4C45A6NMZ5 311 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 HAX1O00165 279 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 WBP4O75554 376 aaKnown RBP11.05□□□□□ -0.64
SENP3-209ENST00000610454 INMTO95050 263 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 KNG1P01042 644 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 ATF1P18846 271 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 PRTN3P24158 256 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 EEF1B2P24534 225 aaKnown RBP11.05□□□□□ -0.64
SENP3-209ENST00000610454 AZGP1P25311 298 aaKnown RBP11.05□□□□□ -0.64
SENP3-209ENST00000610454 PRDX2P32119 198 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 POU3F4P49335 361 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 MTCP1P56278 107 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 GUCA2AQ02747 115 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 GABPB1Q06547 395 aaPredicted RBP11.05□□□□□ -0.64
SENP3-209ENST00000610454 RUSC1-AS1Q66K80 236 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 SLC25A26Q70HW3 274 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 UTS2BQ765I0 119 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 VMO1Q7Z5L0 202 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 MKXQ8IYA7 352 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 C8orf59Q8N0T1 100 aaPredicted RBP11.05□□□□□ -0.64
SENP3-209ENST00000610454 FAM185AQ8N0U4 392 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 ZDHHC22Q8N966 263 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 LY6G5BQ8NDX9 201 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 C8orf46Q8TAG6 207 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 SLAMF9Q96A28 289 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 RNF166Q96A37 237 aaPredicted RBP11.05□□□□□ -0.64
SENP3-209ENST00000610454 SPSB1Q96BD6 273 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 DUX5Q96PT3 197 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 ELL3Q9HB65 397 aaPredicted RBP11.05□□□□□ -0.64
SENP3-209ENST00000610454 FGF20Q9NP95 211 aaPredicted RBP11.05□□□□□ -0.64
SENP3-209ENST00000610454 ESM1Q9NQ30 184 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 ZNF222Q9UK12 451 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 MAB21L2Q9Y586 359 aa11.05□□□□□ -0.64
SENP3-209ENST00000610454 IGHV1-69DA0A0B4J2H0 117 aa11.04□□□□□ -0.64
SENP3-209ENST00000610454 CENPVL3A0A0U1RRI6 287 aa11.04□□□□□ -0.64
SENP3-209ENST00000610454 IGHV1-69P01742 117 aa11.04□□□□□ -0.64
SENP3-209ENST00000610454 CAPGP40121 348 aa11.04□□□□□ -0.64
SENP3-209ENST00000610454 OGFRL1Q5TC84 451 aaPredicted RBP11.04□□□□□ -0.64
SENP3-209ENST00000610454 PDZD9Q8IXQ8 264 aa11.04□□□□□ -0.64
SENP3-209ENST00000610454 CD177Q8N6Q3 437 aa11.04□□□□□ -0.64
SENP3-209ENST00000610454 ASCC1Q8N9N2 400 aaKnown RBP11.04□□□□□ -0.64
SENP3-209ENST00000610454 OR51A4Q8NGJ6 313 aa11.04□□□□□ -0.64
SENP3-209ENST00000610454 OR13C9Q8NGT0 318 aa11.04□□□□□ -0.64
SENP3-209ENST00000610454 OR10AC1Q8NH08 325 aa11.04□□□□□ -0.64
SENP3-209ENST00000610454 EMG1Q92979 244 aaKnown RBP11.04□□□□□ -0.64
SENP3-209ENST00000610454 ZNF48Q96MX3 618 aaPredicted RBP11.04□□□□□ -0.64
SENP3-209ENST00000610454 OPALINQ96PE5 141 aa11.04□□□□□ -0.64
SENP3-209ENST00000610454 JAM3Q9BX67 310 aa11.04□□□□□ -0.64
SENP3-209ENST00000610454 HES4Q9HCC6 221 aa11.04□□□□□ -0.64
SENP3-209ENST00000610454 SIRT7Q9NRC8 400 aa11.04□□□□□ -0.64
SENP3-209ENST00000610454 DHDHQ9UQ10 334 aa11.04□□□□□ -0.64
SENP3-209ENST00000610454 CAB39Q9Y376 341 aaPredicted RBP11.04□□□□□ -0.64
SENP3-209ENST00000610454 EXOSC1Q9Y3B2 195 aaKnown RBP11.04□□□□□ -0.64
SENP3-209ENST00000610454 FAM96BQ9Y3D0 163 aa11.04□□□□□ -0.64
SENP3-209ENST00000610454 HSPE1-MOB4S4R3N1 261 aa11.04□□□□□ -0.64
SENP3-209ENST00000610454 hCG_1809904A0A1W2PP81 198 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 A0A1W2PPE2 198 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 A0A1W2PR64 198 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 A0A1W2PRV1 198 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 H0YAE9 185 aa11.03□□□□□ -0.64
SENP3-209ENST00000610454 M0R1W7 72 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms