RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 HIST1H3AP68431 136 aa19.53■□□□□ 0.72
SHANK2-220ENST00000608988 ZNF266Q14584 549 aa19.53■□□□□ 0.72
SHANK2-220ENST00000608988 C10orf128Q5T292 105 aa19.53■□□□□ 0.72
SHANK2-220ENST00000608988 HIST2H3PS2Q5TEC6 136 aa19.53■□□□□ 0.72
SHANK2-220ENST00000608988 CARD17Q5XLA6 110 aa19.53■□□□□ 0.72
SHANK2-220ENST00000608988 FBXW12Q6X9E4 464 aa19.53■□□□□ 0.72
SHANK2-220ENST00000608988 SLC22A8Q8TCC7 542 aa19.53■□□□□ 0.72
SHANK2-220ENST00000608988 MUCL1Q96DR8 90 aa19.53■□□□□ 0.72
SHANK2-220ENST00000608988 MRPL38Q96DV4 380 aaKnown RBP19.53■□□□□ 0.72
SHANK2-220ENST00000608988 LIN37Q96GY3 246 aaPredicted RBP19.53■□□□□ 0.72
SHANK2-220ENST00000608988 ABHD14BQ96IU4 210 aa19.53■□□□□ 0.72
SHANK2-220ENST00000608988 CYYR1Q96J86 154 aa19.53■□□□□ 0.72
SHANK2-220ENST00000608988 RSRP1Q9BUV0 290 aa19.53■□□□□ 0.72
SHANK2-220ENST00000608988 BCO1Q9HAY6 547 aa19.53■□□□□ 0.72
SHANK2-220ENST00000608988 ELL3Q9HB65 397 aaPredicted RBP19.53■□□□□ 0.72
SHANK2-220ENST00000608988 B3GALT1Q9Y5Z6 326 aa19.53■□□□□ 0.72
SHANK2-220ENST00000608988 SLCO1B1Q9Y6L6 691 aa19.53■□□□□ 0.72
SHANK2-220ENST00000608988 CXorf65A6NEN9 183 aa19.52■□□□□ 0.72
SHANK2-220ENST00000608988 OTX1P32242 354 aaPredicted RBP19.52■□□□□ 0.72
SHANK2-220ENST00000608988 OR2B8PP59922 312 aa19.52■□□□□ 0.72
SHANK2-220ENST00000608988 GNMTQ14749 295 aa19.52■□□□□ 0.72
SHANK2-220ENST00000608988 TGIF1Q15583 401 aa19.52■□□□□ 0.72
SHANK2-220ENST00000608988 ANKRD37Q7Z713 158 aa19.52■□□□□ 0.72
SHANK2-220ENST00000608988 PIGQQ9BRB3 760 aa19.52■□□□□ 0.72
SHANK2-220ENST00000608988 GGACTQ9BVM4 153 aa19.52■□□□□ 0.72
SHANK2-220ENST00000608988 PIGLQ9Y2B2 252 aa19.52■□□□□ 0.72
SHANK2-220ENST00000608988 FBXO7Q9Y3I1 522 aa19.52■□□□□ 0.72
SHANK2-220ENST00000608988 F5P12259 2224 aa19.52■□□□□ 0.72
SHANK2-220ENST00000608988 CHD7Q9P2D1 2997 aa19.52■□□□□ 0.71
SHANK2-220ENST00000608988 ANOS1P23352 680 aa19.52■□□□□ 0.71
SHANK2-220ENST00000608988 GABRR1P24046 479 aa19.52■□□□□ 0.71
SHANK2-220ENST00000608988 SFTPDP35247 375 aa19.52■□□□□ 0.71
SHANK2-220ENST00000608988 C1orf189Q5VU69 101 aa19.52■□□□□ 0.71
SHANK2-220ENST00000608988 MSI2Q96DH6 328 aaKnown RBP19.52■□□□□ 0.71
SHANK2-220ENST00000608988 MARS2Q96GW9 593 aaKnown RBP19.52■□□□□ 0.71
SHANK2-220ENST00000608988 NELFAQ9H3P2 528 aa19.52■□□□□ 0.71
SHANK2-220ENST00000608988 SIRT7Q9NRC8 400 aa19.52■□□□□ 0.71
SHANK2-220ENST00000608988 TREM2Q9NZC2 230 aa19.52■□□□□ 0.71
SHANK2-220ENST00000608988 A0A1W2PR77 199 aa19.51■□□□□ 0.71
SHANK2-220ENST00000608988 ZNF850A8MQ14 1090 aa19.51■□□□□ 0.71
SHANK2-220ENST00000608988 SHISA8B8ZZ34 492 aa19.51■□□□□ 0.71
SHANK2-220ENST00000608988 CDS2O95674 445 aa19.51■□□□□ 0.71
SHANK2-220ENST00000608988 FOLR1P15328 257 aa19.51■□□□□ 0.71
SHANK2-220ENST00000608988 FAHP16930 419 aa19.51■□□□□ 0.71
SHANK2-220ENST00000608988 CD38P28907 300 aa19.51■□□□□ 0.71
SHANK2-220ENST00000608988 KIAA0141Q14154 515 aaPredicted RBP19.51■□□□□ 0.71
SHANK2-220ENST00000608988 OR4D5Q8NGN0 318 aa19.51■□□□□ 0.71
SHANK2-220ENST00000608988 FAM213BQ8TBF2 198 aa19.51■□□□□ 0.71
SHANK2-220ENST00000608988 NPRL2Q8WTW4 380 aa19.51■□□□□ 0.71
SHANK2-220ENST00000608988 PAPOLGQ9BWT3 736 aaKnown RBP19.51■□□□□ 0.71
SHANK2-220ENST00000608988 ZDHHC8Q9ULC8 765 aa19.51■□□□□ 0.71
SHANK2-220ENST00000608988 RCL1Q9Y2P8 373 aaKnown RBP19.51■□□□□ 0.71
SHANK2-220ENST00000608988 IGLV3-12A0A075B6K2 115 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 RBFOX3A6NFN3 312 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 E9PLN8 166 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 DUX1O43812 170 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 PITX3O75364 302 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 CD81P60033 236 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 C16orf47Q6ZP98 133 aaPredicted RBP19.5■□□□□ 0.71
SHANK2-220ENST00000608988 LYZL2Q7Z4W2 148 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 FAM185AQ8N0U4 392 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 TMEM106CQ9BVX2 250 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 HIPK2Q9H2X6 1198 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 KIAA1456Q9P272 454 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 AK3Q9UIJ7 227 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 IGHV1OR21-1A0A087WYE8 117 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 OR13C7P0DN81 318 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 CD27P26842 260 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 S100A2P29034 98 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 PTGDSP41222 190 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 FHITP49789 147 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 OR8B8Q15620 311 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 ASCL4Q6XD76 172 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 ZNF600Q6ZNG1 722 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.5■□□□□ 0.71
SHANK2-220ENST00000608988 MOB3AQ96BX8 217 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 BOD1Q96IK1 185 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 SH3BGRL3Q9H299 93 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 C11orf1Q9H5F2 150 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 SLC2A9Q9NRM0 540 aa19.5■□□□□ 0.71
SHANK2-220ENST00000608988 PTRH2Q9Y3E5 179 aaKnown RBP19.5■□□□□ 0.71
SHANK2-220ENST00000608988 MSTNO14793 375 aa19.49■□□□□ 0.71
SHANK2-220ENST00000608988 SLC34A2O95436 690 aa19.49■□□□□ 0.71
SHANK2-220ENST00000608988 DIRAS3O95661 229 aa19.49■□□□□ 0.71
SHANK2-220ENST00000608988 F10P00742 488 aa19.49■□□□□ 0.71
SHANK2-220ENST00000608988 PPP1CCP36873 323 aaKnown RBP19.49■□□□□ 0.71
SHANK2-220ENST00000608988 HNRNPKP61978 463 aaKnown RBP eCLIP19.49■□□□□ 0.712e-6■■■□□ 16
SHANK2-220ENST00000608988 EWSR1Q01844 656 aaKnown RBP eCLIP19.49■□□□□ 0.71
SHANK2-220ENST00000608988 TMEM182Q6ZP80 229 aaPredicted RBP19.49■□□□□ 0.71
SHANK2-220ENST00000608988 HSD17B11Q8NBQ5 300 aa19.49■□□□□ 0.71
SHANK2-220ENST00000608988 OR2M3Q8NG83 312 aa19.49■□□□□ 0.71
SHANK2-220ENST00000608988 OR13D1Q8NGV5 346 aa19.49■□□□□ 0.71
SHANK2-220ENST00000608988 TMEM54Q969K7 222 aa19.49■□□□□ 0.71
SHANK2-220ENST00000608988 TOMM40LQ969M1 308 aa19.49■□□□□ 0.71
SHANK2-220ENST00000608988 HDHD3Q9BSH5 251 aaPredicted RBP19.49■□□□□ 0.71
SHANK2-220ENST00000608988 BCL2L14Q9BZR8 327 aa19.49■□□□□ 0.71
SHANK2-220ENST00000608988 LIME1Q9H400 295 aa19.49■□□□□ 0.71
SHANK2-220ENST00000608988 PARPBPQ9NWS1 579 aa19.49■□□□□ 0.71
SHANK2-220ENST00000608988 CLEC1BQ9P126 229 aa19.49■□□□□ 0.71
SHANK2-220ENST00000608988 HSPA12AO43301 675 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms