RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 INTS14Q96SY0 518 aa12.18□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 TMEM133Q9H2Q1 129 aa12.18□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 NIPAL2Q9H841 368 aa12.18□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 DPM3Q9P2X0 92 aa12.18□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 SLC22A13Q9Y226 551 aa12.18□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 POLDIP2Q9Y2S7 368 aa12.18□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 LYSTQ99698 3801 aa12.18□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 STAB2Q8WWQ8 2551 aa12.18□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 hADV38S2A0JD32 116 aa12.17□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 SEC14L6B5MCN3 397 aa12.17□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 GSSP48637 474 aa12.17□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 CRMP1Q14194 572 aa12.17□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 COMMD2Q86X83 199 aa12.17□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 ZNF573Q86YE8 665 aa12.17□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 BATF2Q8N1L9 274 aa12.17□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 COMMD1Q8N668 190 aa12.17□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 OR4P4Q8NGL7 312 aa12.17□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 RAX2Q96IS3 184 aa12.17□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 C7orf34Q96L11 122 aa12.17□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 CITED4Q96RK1 184 aa12.17□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 NRIP2Q9BQI9 281 aa12.17□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 INTS9Q9NV88 658 aaKnown RBP12.17□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 SAMD4AQ9UPU9 718 aaKnown RBP12.17□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 CDH10Q9Y6N8 788 aa12.17□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 GSC2O15499 205 aa12.16□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 SNRNP70P08621 437 aaKnown RBP12.16□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 CLUP10909 449 aa12.16□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 MEF2CQ06413 473 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 EDDM3AQ14507 147 aa12.16□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 OR8B12Q8NGG6 310 aa12.16□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 OR8U1Q8NH10 309 aa12.16□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 ZNF596Q8TC21 504 aa12.16□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 RCN3Q96D15 328 aa12.16□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 NOL4LQ96MY1 436 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 AMELYQ99218 206 aa12.16□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 KCTD14Q9BQ13 255 aaPredicted RBP12.16□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 DCAF13Q9NV06 445 aaKnown RBP12.16□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 MOB4Q9Y3A3 225 aa12.16□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 HSPE1-MOB4S4R3N1 261 aa12.16□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 DNAH7Q8WXX0 4024 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 DNAH1Q9P2D7 4330 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 SERPINE3A8MV23 424 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 LEUTXA8MZ59 168 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 J3QT63 122 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 NME4O00746 187 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 NOS1APO75052 506 aaPredicted RBP12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 GMNNO75496 209 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 LYNP07948 512 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 H2AFXP16104 143 aaPredicted RBP12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 GSTT1P30711 240 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 CEACAM3P40198 252 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 RIPPLY1Q0D2K3 151 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 ZNF684Q5T5D7 378 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 ABHD12Q8N2K0 398 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 OR4Q3Q8NH05 313 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 THEM6Q8WUY1 208 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 ISOC1Q96CN7 298 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 NMNAT2Q9BZQ4 307 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 LYVE1Q9Y5Y7 322 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 LINC00312Q9Y6C7 94 aa12.15□□□□□ -0.46
NEDD8-MDP1-204ENST00000605847 PSMD9O00233 223 aa12.14□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 EDF1O60869 148 aaKnown RBP12.14□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 JTBO76095 146 aa12.14□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 IFNGP01579 166 aa12.14□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 MNDAP41218 407 aa12.14□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 ZNF260Q3ZCT1 412 aa12.14□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 SAMD4BQ5PRF9 694 aaKnown RBP12.14□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 OR52W1Q6IF63 320 aa12.14□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 OVCH2Q7RTZ1 564 aa12.14□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 TRAPPC6BQ86SZ2 158 aa12.14□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 OR8H2Q8N162 312 aa12.14□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 IL20Q9NYY1 176 aa12.14□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 SCOCQ9UIL1 159 aa12.14□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 LINC00527Q9UJ94 153 aa12.14□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 ENPP5Q9UJA9 477 aa12.14□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 V9GYQ6 96 aa12.14□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 RIIAD1A6NNX1 92 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 NDUFAB1O14561 156 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 NRASP01111 189 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 FAM106CPP0CH98 169 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 ATP6V1B1P15313 513 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 ZNF3P17036 446 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 PSMA6P60900 246 aaKnown RBP12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 BDH1Q02338 343 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 DEFB136Q30KP8 78 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 LINC01590Q5TEZ4 76 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 LCN1P1Q5VSP4 162 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 GLYATQ6IB77 296 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 LCNL1Q6ZST4 164 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 KRT74Q7RTS7 529 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 TCF23Q7RTU1 214 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 RTN4RL2Q86UN3 420 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 FOXRED2Q8IWF2 684 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 TPRX1Q8N7U7 411 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 ITFG2Q969R8 447 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 MCUR1Q96AQ8 359 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 CREB3L1Q96BA8 519 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 OTULINQ96BN8 352 aa12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 HOPXQ9BPY8 73 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-MDP1-204ENST00000605847 TSSK6Q9BXA6 273 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms