RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 MZT1Q08AG7 82 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 PLA2G7Q13093 441 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 CNN3Q15417 329 aaKnown RBP8.58□□□□□ -1.04
UPF1-213ENST00000601981 MSMPQ1L6U9 139 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 ALKBH6Q3KRA9 238 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 ZNF57Q68EA5 555 aaPredicted RBP8.58□□□□□ -1.04
UPF1-213ENST00000601981 TMEM42Q69YG0 159 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 OR2T2Q6IF00 324 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 OR2W3Q7Z3T1 314 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 NRARPQ7Z6K4 114 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 IZUMO1Q8IYV9 350 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 DTX3Q8N9I9 347 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 PNLDC1Q8NA58 520 aaKnown RBP8.58□□□□□ -1.04
UPF1-213ENST00000601981 OR8G5Q8NG78 346 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 OR13G1Q8NGZ3 307 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 SPSB1Q96BD6 273 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 TECTBQ96PL2 329 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 FOXC2Q99958 501 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 C7orf50Q9BRJ6 194 aaKnown RBP8.58□□□□□ -1.04
UPF1-213ENST00000601981 EGLN1Q9GZT9 426 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 POFUT1Q9H488 388 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 DECR2Q9NUI1 292 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 MYEF2Q9P2K5 600 aaKnown RBP8.58□□□□□ -1.04
UPF1-213ENST00000601981 GHRLQ9UBU3 117 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 RAB22AQ9UL26 194 aa8.58□□□□□ -1.04
UPF1-213ENST00000601981 MRPS7Q9Y2R9 242 aaKnown RBP8.58□□□□□ -1.04
UPF1-213ENST00000601981 CCDC168Q8NDH2 2452 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.57□□□□□ -1.04
UPF1-213ENST00000601981 ZNF816-ZNF321PA0A0X1KG74 233 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 CD300LBA8K4G0 201 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 TMEM14DPA8MWL7 114 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 LYRM1O43325 122 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 LANCL1O43813 399 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 NAT2P11245 290 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 PRKACBP22694 351 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 QRFPP83859 136 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 TNK1Q13470 666 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 UBE2V2Q15819 145 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 CLVS2Q5SYC1 327 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 SHEQ5VZ18 495 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 AWAT2Q6E213 333 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 RAB12Q6IQ22 244 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 CCBE1Q6UXH8 406 aaPredicted RBP8.57□□□□□ -1.04
UPF1-213ENST00000601981 DNM1P46Q6ZS02 220 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 KRT74Q7RTS7 529 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 BHLHE23Q8NDY6 225 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 PHF21AQ96BD5 680 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 ITPKCQ96DU7 683 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 NKX3-1Q99801 234 aaPredicted RBP8.57□□□□□ -1.04
UPF1-213ENST00000601981 NUDT16L1Q9BRJ7 211 aaKnown RBP8.57□□□□□ -1.04
UPF1-213ENST00000601981 KCNK15Q9H427 330 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 TMEM100Q9NV29 134 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 RBFOX1Q9NWB1 397 aaKnown RBP8.57□□□□□ -1.04
UPF1-213ENST00000601981 NKIRAS2Q9NYR9 191 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 MRPL15Q9P015 296 aaKnown RBP8.57□□□□□ -1.04
UPF1-213ENST00000601981 MRPS28Q9Y2Q9 187 aaKnown RBP8.57□□□□□ -1.04
UPF1-213ENST00000601981 RBMX2Q9Y388 322 aaKnown RBP8.57□□□□□ -1.04
UPF1-213ENST00000601981 TANC2Q9HCD6 1990 aa8.57□□□□□ -1.04
UPF1-213ENST00000601981 LINC00854A0A1B0GVQ3 168 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 FUOMA2VDF0 154 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 METTL21EPA6NDL7 271 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 SPRY3O43610 288 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 SSX4O60224 188 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 GMDSO60547 372 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 ECDO95905 644 aaPredicted RBP8.56□□□□□ -1.04
UPF1-213ENST00000601981 F12P00748 615 aaPredicted RBP8.56□□□□□ -1.04
UPF1-213ENST00000601981 ADH4P08319 380 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 CD3GP09693 182 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 VSIG8P0DPA2 414 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 TNFRSF1AP19438 455 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 GDNFP39905 211 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 SRP9P49458 86 aaKnown RBP8.56□□□□□ -1.04
UPF1-213ENST00000601981 BCAP31P51572 246 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 DSCR9P59020 149 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 AP3S2P59780 193 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 DYRK1AQ13627 763 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 TESK1Q15569 626 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 OR8G1Q15617 311 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 KISS1Q15726 138 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 FAM189A2Q15884 450 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 CLEC2AQ6UVW9 174 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 GLIPR1L1Q6UWM5 242 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 PRSS57Q6UWY2 283 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 LHFPL2Q6ZUX7 228 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 BIVMQ86UB2 503 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 ANGPTL5Q86XS5 388 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 SPERTQ8NA61 448 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 OR2Z1Q8NG97 314 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 OR56B2PQ8NGI1 322 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 OR52I2Q8NH67 350 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 ENKURQ8TC29 256 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 UBASH3BQ8TF42 649 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 FCAMRQ8WWV6 532 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 FAM46BQ96A09 425 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 ELMOD3Q96FG2 381 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 C1orf147Q96MC9 270 aaPredicted RBP8.56□□□□□ -1.04
UPF1-213ENST00000601981 GPER1Q99527 375 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 PAPOLGQ9BWT3 736 aaKnown RBP8.56□□□□□ -1.04
UPF1-213ENST00000601981 ATG5Q9H1Y0 275 aa8.56□□□□□ -1.04
UPF1-213ENST00000601981 AUNIPQ9H7T9 357 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms