RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 CLN6Q9NWW5 311 aa13.8□□□□□ -0.2
SCAF1-204ENST00000601038 MRM2Q9UI43 246 aaKnown RBP13.8□□□□□ -0.2
SCAF1-204ENST00000601038 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.8□□□□□ -0.2
SCAF1-204ENST00000601038 SIGLEC9Q9Y336 463 aa13.8□□□□□ -0.2
SCAF1-204ENST00000601038 TET2Q6N021 2002 aaPredicted RBP13.8□□□□□ -0.2
SCAF1-204ENST00000601038 NOTCH1P46531 2555 aa13.79□□□□□ -0.2
SCAF1-204ENST00000601038 ZNF670-ZNF695F2Z2N8 137 aa13.79□□□□□ -0.2
SCAF1-204ENST00000601038 M0R129 80 aa13.79□□□□□ -0.2
SCAF1-204ENST00000601038 MITFO75030 526 aaPredicted RBP13.79□□□□□ -0.2
SCAF1-204ENST00000601038 TK1P04183 234 aa13.79□□□□□ -0.2
SCAF1-204ENST00000601038 CCL3L1P16619 93 aa13.79□□□□□ -0.2
SCAF1-204ENST00000601038 EPHA2P29317 976 aa13.79□□□□□ -0.2
SCAF1-204ENST00000601038 ERVFRD-1P60508 538 aa13.79□□□□□ -0.2
SCAF1-204ENST00000601038 ERVK11-1P61568 191 aa13.79□□□□□ -0.2
SCAF1-204ENST00000601038 C12orf73Q69YU5 71 aa13.79□□□□□ -0.2
SCAF1-204ENST00000601038 LIAT1Q6ZQX7 453 aa13.79□□□□□ -0.2
SCAF1-204ENST00000601038 PLEKHG7Q6ZR37 379 aa13.79□□□□□ -0.2
SCAF1-204ENST00000601038 OR2T6Q8NHC8 308 aa13.79□□□□□ -0.2
SCAF1-204ENST00000601038 PIFOQ8TCI5 191 aa13.79□□□□□ -0.2
SCAF1-204ENST00000601038 PKIBQ9C010 78 aa13.79□□□□□ -0.2
SCAF1-204ENST00000601038 KRT84Q9NSB2 600 aa13.79□□□□□ -0.2
SCAF1-204ENST00000601038 OR14J1Q9UGF5 321 aa13.79□□□□□ -0.2
SCAF1-204ENST00000601038 A6NIN4 97 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 FAM90A8PA6NJQ4 464 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 ZAR1LA6NP61 321 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 K7N7A8 449 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 CCL1P22362 96 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 COX7A1P24310 79 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 PAX6P26367 422 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 BMXP51813 675 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 IL24Q13007 206 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 ZNF273Q14593 569 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 ANGPTL5Q86XS5 388 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 C1QL4Q86Z23 238 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 GID4Q8IVV7 300 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 CFHR4Q92496 578 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 IL4I1Q96RQ9 567 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 NPFFR1Q9GZQ6 430 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 SLC22A13Q9Y226 551 aa13.78□□□□□ -0.2
SCAF1-204ENST00000601038 C17orf98A8MV24 154 aa13.77□□□□□ -0.21
SCAF1-204ENST00000601038 VGLL3A8MV65 326 aa13.77□□□□□ -0.21
SCAF1-204ENST00000601038 G3V2T6 193 aa13.77□□□□□ -0.21
SCAF1-204ENST00000601038 DLX6P56179 175 aa13.77□□□□□ -0.21
SCAF1-204ENST00000601038 ATP6AP1Q15904 470 aa13.77□□□□□ -0.21
SCAF1-204ENST00000601038 KDM4DQ6B0I6 523 aa13.77□□□□□ -0.21
SCAF1-204ENST00000601038 BATF2Q8N1L9 274 aa13.77□□□□□ -0.21
SCAF1-204ENST00000601038 FOXJ3Q9UPW0 622 aa13.77□□□□□ -0.21
SCAF1-204ENST00000601038 SLC7A11Q9UPY5 501 aa13.77□□□□□ -0.21
SCAF1-204ENST00000601038 MEGF11A6BM72 1044 aa13.76□□□□□ -0.21
SCAF1-204ENST00000601038 CHST1O43916 411 aa13.76□□□□□ -0.21
SCAF1-204ENST00000601038 RPP14O95059 124 aaKnown RBP13.76□□□□□ -0.21
SCAF1-204ENST00000601038 KRT8P05787 483 aa13.76□□□□□ -0.21
SCAF1-204ENST00000601038 CHRM2P08172 466 aa13.76□□□□□ -0.21
SCAF1-204ENST00000601038 PIPP12273 146 aaPredicted RBP13.76□□□□□ -0.21
SCAF1-204ENST00000601038 COL10A1Q03692 680 aa13.76□□□□□ -0.21
SCAF1-204ENST00000601038 ZNF782Q6ZMW2 699 aaPredicted RBP13.76□□□□□ -0.21
SCAF1-204ENST00000601038 SSX6Q7RTT6 188 aa13.76□□□□□ -0.21
SCAF1-204ENST00000601038 LHFPL4Q7Z7J7 247 aa13.76□□□□□ -0.21
SCAF1-204ENST00000601038 KLHDC1Q8N7A1 406 aa13.76□□□□□ -0.21
SCAF1-204ENST00000601038 YIPF7Q8N8F6 280 aa13.76□□□□□ -0.21
SCAF1-204ENST00000601038 TRMT10AQ8TBZ6 339 aaKnown RBP13.76□□□□□ -0.21
SCAF1-204ENST00000601038 BCAS4Q8TDM0 211 aa13.76□□□□□ -0.21
SCAF1-204ENST00000601038 CDCA4Q9BXL8 241 aa13.76□□□□□ -0.21
SCAF1-204ENST00000601038 CADM1Q9BY67 442 aaKnown RBP13.76□□□□□ -0.21
SCAF1-204ENST00000601038 WARS2Q9UGM6 360 aaKnown RBP13.76□□□□□ -0.21
SCAF1-204ENST00000601038 ENOPH1Q9UHY7 261 aa13.76□□□□□ -0.21
SCAF1-204ENST00000601038 TGP01266 2768 aa13.76□□□□□ -0.21
SCAF1-204ENST00000601038 FAM230AA0A1W2PPH8 454 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 SYT7O43581 403 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 ZNF737O75373 536 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 RBP4P02753 201 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 OPN1MWP04001 364 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 OR2T7P0C7T2 308 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 ZNF728P0DKX0 622 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 OPN1MW2P0DN77 364 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 OPN1MW3P0DN78 364 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 UBE2V2Q15819 145 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 CATSPERDQ86XM0 798 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 ZDHHC13Q8IUH4 622 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 ASCC1Q8N9N2 400 aaKnown RBP13.75□□□□□ -0.21
SCAF1-204ENST00000601038 OR13D1Q8NGV5 346 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 MALSU1Q96EH3 234 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 CEP19Q96LK0 163 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 GABARAPL1Q9H0R8 117 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 PLEKHA1Q9HB21 404 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 MTCH1Q9NZJ7 389 aa13.75□□□□□ -0.21
SCAF1-204ENST00000601038 TBL2Q9Y4P3 447 aaKnown RBP13.75□□□□□ -0.21
SCAF1-204ENST00000601038 A0A1W2PQL4 384 aaPredicted RBP13.74□□□□□ -0.21
SCAF1-204ENST00000601038 METTL15A6NJ78 407 aa13.74□□□□□ -0.21
SCAF1-204ENST00000601038 F8VVB4 439 aa13.74□□□□□ -0.21
SCAF1-204ENST00000601038 F8VWA3 439 aa13.74□□□□□ -0.21
SCAF1-204ENST00000601038 SULT1C4O75897 302 aa13.74□□□□□ -0.21
SCAF1-204ENST00000601038 ARG1P05089 322 aa13.74□□□□□ -0.21
SCAF1-204ENST00000601038 FASP25445 335 aa13.74□□□□□ -0.21
SCAF1-204ENST00000601038 FUT6P51993 359 aa13.74□□□□□ -0.21
SCAF1-204ENST00000601038 ODF4Q2M2E3 257 aa13.74□□□□□ -0.21
SCAF1-204ENST00000601038 GDPD3Q7L5L3 318 aa13.74□□□□□ -0.21
SCAF1-204ENST00000601038 DYNAPQ8N1N2 210 aa13.74□□□□□ -0.21
SCAF1-204ENST00000601038 C11orf44Q8N8P7 122 aa13.74□□□□□ -0.21
SCAF1-204ENST00000601038 CCDC54Q8NEL0 328 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms