RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	GIF	P27352	417 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	RBMX	P38159	391 aa	Known RBP	18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	OR3A4P	P47883	348 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	ZP1	P60852	638 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	IL24	Q13007	206 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	MPPED2	Q15777	294 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	AWAT2	Q6E213	333 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	CRIP3	Q6Q6R5	217 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	SLC25A26	Q70HW3	274 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	NR2C2AP	Q86WQ0	139 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	SAXO1	Q8IYX7	474 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	AQP3	Q92482	292 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	HPS1	Q92902	700 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	NKX3-1	Q99801	234 aa	Predicted RBP	18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	DAPK2	Q9UIK4	370 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	ING4	Q9UNL4	249 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	hCG_1807616	A0A1W2PRN6	198 aa		18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	SPRY1	O43609	319 aa	Predicted RBP	18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	UBB	P0CG47	229 aa		18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	IRF2	P14316	349 aa		18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	PMEL	P40967	661 aa		18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	CAPZA1	P52907	286 aa		18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	IDNK	Q5T6J7	187 aa		18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	SPNS3	Q6ZMD2	512 aa		18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	C11orf53	Q8IXP5	236 aa		18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	PXT1	Q8NFP0	134 aa		18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	OR4D6	Q8NGJ1	314 aa		18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	OR51F2	Q8NH61	342 aa		18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	DYNC2LI1	Q8TCX1	351 aa		18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	BPESC1	Q9GZL8	116 aa		18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	METTL9	Q9H1A3	318 aa		18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	ELL3	Q9HB65	397 aa	Predicted RBP	18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	PCDHB16	Q9NRJ7	776 aa		18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	TMEM106B	Q9NUM4	274 aa		18.48	■□□□□ 0.55
LTBP4-227	ENST00000600026	SETD2	Q9BYW2	2564 aa	Predicted RBP	18.47	■□□□□ 0.55
LTBP4-227	ENST00000600026	LRRC30	A6NM36	301 aa		18.47	■□□□□ 0.55
LTBP4-227	ENST00000600026	VWC2L	B2RUY7	222 aa		18.47	■□□□□ 0.55
LTBP4-227	ENST00000600026	CLDN25	C9JDP6	229 aa		18.47	■□□□□ 0.55
LTBP4-227	ENST00000600026	TRAPPC2L	H3BP13	241 aa		18.47	■□□□□ 0.55
LTBP4-227	ENST00000600026	SYNGR1	O43759	233 aa		18.47	■□□□□ 0.55
LTBP4-227	ENST00000600026	SLC25A16	P16260	332 aa		18.47	■□□□□ 0.55
LTBP4-227	ENST00000600026	CFP	P27918	469 aa		18.47	■□□□□ 0.55
LTBP4-227	ENST00000600026	FAM166A	Q6J272	317 aa		18.47	■□□□□ 0.55
LTBP4-227	ENST00000600026	GLIPR1L1	Q6UWM5	242 aa		18.47	■□□□□ 0.55
LTBP4-227	ENST00000600026	OR10Z1	Q8NGY1	313 aa		18.47	■□□□□ 0.55
LTBP4-227	ENST00000600026		Q8TCH9	128 aa		18.47	■□□□□ 0.55
LTBP4-227	ENST00000600026	SMURF1	Q9HCE7	757 aa		18.47	■□□□□ 0.55
LTBP4-227	ENST00000600026	CCDC59	Q9P031	241 aa	Known RBP	18.47	■□□□□ 0.55
LTBP4-227	ENST00000600026	GHRL	Q9UBU3	117 aa		18.47	■□□□□ 0.55
LTBP4-227	ENST00000600026	CR1	P17927	2039 aa		18.47	■□□□□ 0.55
LTBP4-227	ENST00000600026	PPIH	O43447	177 aa	Known RBP	18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	ANGPTL7	O43827	346 aa		18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	SLC2A2	P11168	524 aa	Predicted RBP	18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	ZNF182	P17025	639 aa	Predicted RBP	18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	NR4A2	P43354	598 aa		18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	GPR6	P46095	362 aa	Predicted RBP	18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	TMEM33	P57088	247 aa		18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	GPR176	Q14439	515 aa		18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	P2RY14	Q15391	338 aa		18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	RSU1	Q15404	277 aa		18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	WDR82	Q6UXN9	313 aa		18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	ZNF826P	Q6ZT77	177 aa		18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	TBC1D15	Q8TC07	691 aa		18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	AP3S1	Q92572	193 aa		18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	SLAMF9	Q96A28	289 aa		18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	DCUN1D5	Q9BTE7	237 aa		18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	MRI1	Q9BV20	369 aa		18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	RNF7	Q9UBF6	113 aa		18.46	■□□□□ 0.55
LTBP4-227	ENST00000600026	ZNF469	Q96JG9	3925 aa	Predicted RBP	18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026	ZNF780A	O75290	641 aa	Predicted RBP	18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026	RHBDL1	O75783	438 aa		18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026	BPNT1	O95861	308 aa		18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026	CYB5R3	P00387	301 aa	Predicted RBP	18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026	ACAA1	P09110	424 aa	Predicted RBP	18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026	ARSB	P15848	533 aa		18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026	CLDN12	P56749	244 aa		18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026	DGUOK	Q16854	277 aa		18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026	ZNF181	Q2M3W8	571 aa		18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026	ASCL4	Q6XD76	172 aa		18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026		Q8IYB0	196 aa		18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026	C1orf87	Q8N0U7	546 aa		18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026	LRRC29	Q8WV35	223 aa		18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026	SLC25A28	Q96A46	364 aa		18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026	FAM3D	Q96BQ1	224 aa		18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026	KCTD12	Q96CX2	325 aa	Known RBP	18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026	CEP19	Q96LK0	163 aa		18.45	■□□□□ 0.54
LTBP4-227	ENST00000600026		A0A096LNT2	108 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	RNF223	E7ERA6	249 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	TMEM178B	H3BS89	294 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	CSTB	P04080	98 aa	Known RBP	18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	PGA5	P0DJD9	388 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	CALCB	P10092	127 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	CFHR2	P36980	270 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	AVPI1	Q5T686	147 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	C1QL2	Q7Z5L3	287 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	POC1A	Q8NBT0	407 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	OR51D1	Q8NGF3	324 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	ACOT12	Q8WYK0	555 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	BARHL1	Q9BZE3	327 aa		18.44	■□□□□ 0.54
LTBP4-227	ENST00000600026	LIN7B	Q9HAP6	207 aa		18.44	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms