RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 J3QRE1 110 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 SYNGR1O43759 233 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 IGHV1-69P01742 117 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 SFTPBP07988 381 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 MYL12AP19105 171 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 MTCP1P56278 107 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 ISL1P61371 349 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 DGUOKQ16854 277 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 NCR3LG1Q68D85 454 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 C1orf122Q6ZSJ8 110 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 LHFPL2Q6ZUX7 228 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 VMO1Q7Z5L0 202 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 ANGPTL5Q86XS5 388 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 RDH10Q8IZV5 341 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 FAM185AQ8N0U4 392 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 ZSCAN4Q8NAM6 433 aaPredicted RBP11.68□□□□□ -0.54
LIG1-218ENST00000599322 SPSB1Q96BD6 273 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 CPNE2Q96FN4 548 aaPredicted RBP11.68□□□□□ -0.54
LIG1-218ENST00000599322 SDSLQ96GA7 329 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 CEP19Q96LK0 163 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 TBX15Q96SF7 602 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 SIRPDQ9H106 197 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 FRRS1LQ9P0K9 344 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 AASSQ9UDR5 926 aa11.68□□□□□ -0.54
LIG1-218ENST00000599322 CENPVL3A0A0U1RRI6 287 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 TMEM89A2RUT3 159 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 BTBD17A6NE02 478 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 TMEM212A6NML5 194 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 E9PQ18 207 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 CLDN34H7C241 214 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 M0R1W7 72 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 MAGEB3O15480 346 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 KNG1P01042 644 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 CHRM2P08172 466 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 MMP9P14780 707 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 GABRB1P18505 474 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 ATF1P18846 271 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 MPZP25189 248 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 DCKP27707 260 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 KIR3DL2P43630 455 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 IL18R1Q13478 541 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 UBE2V2Q15819 145 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 UTS2BQ765I0 119 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 ZNRF1Q8ND25 227 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 OR52I1Q8NGK6 324 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 OR5D14Q8NGL3 314 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 OR5D13Q8NGL4 314 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 OR5AK2Q8NH90 309 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 C8orf46Q8TAG6 207 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 PPP1R35Q8TAP8 253 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 PELI1Q96FA3 418 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 ZNF488Q96MN9 340 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 DUX5Q96PT3 197 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 NRIP2Q9BQI9 281 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 METTL8Q9H825 291 aaKnown RBP11.67□□□□□ -0.54
LIG1-218ENST00000599322 MRPS18AQ9NVS2 196 aaKnown RBP11.67□□□□□ -0.54
LIG1-218ENST00000599322 ERVK13-1Q9NX77 482 aa11.67□□□□□ -0.54
LIG1-218ENST00000599322 IGKV1D-17A0A075B6S4 117 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 TRBV2A0A0J9YWF9 115 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 A0A1B0GW55 424 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 PAHP00439 452 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 IGHA1P01876 353 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 CD2P06729 351 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 RNASE1P07998 156 aaKnown RBP11.66□□□□□ -0.54
LIG1-218ENST00000599322 DUX4L2P0CJ85 424 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 DUX4L3P0CJ86 424 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 DUX4L4P0CJ87 422 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 DUX4L5P0CJ88 424 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 DUX4L6P0CJ89 424 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 DUX4L7P0CJ90 424 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 AMY2BP19961 511 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 AZGP1P25311 298 aaKnown RBP11.66□□□□□ -0.54
LIG1-218ENST00000599322 POU3F4P49335 361 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 ELF3P78545 371 aaPredicted RBP11.66□□□□□ -0.54
LIG1-218ENST00000599322 DEFB112Q30KQ8 113 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 DUX4L9Q6RFH8 374 aaPredicted RBP11.66□□□□□ -0.54
LIG1-218ENST00000599322 SLC25A26Q70HW3 274 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 SERPINA12Q8IW75 414 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 ASCC1Q8N9N2 400 aaKnown RBP11.66□□□□□ -0.54
LIG1-218ENST00000599322 TSEN15Q8WW01 171 aaKnown RBP11.66□□□□□ -0.54
LIG1-218ENST00000599322 EMG1Q92979 244 aaKnown RBP11.66□□□□□ -0.54
LIG1-218ENST00000599322 FAM234AQ9H0X4 552 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 DPAGT1Q9H3H5 408 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 ESM1Q9NQ30 184 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 DUX4Q9UBX2 424 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 DHDHQ9UQ10 334 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 MYRFQ9Y2G1 1151 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 SF3B6Q9Y3B4 125 aaKnown RBP11.66□□□□□ -0.54
LIG1-218ENST00000599322 MAB21L2Q9Y586 359 aa11.66□□□□□ -0.54
LIG1-218ENST00000599322 HOXA3O43365 443 aaPredicted RBP11.65□□□□□ -0.54
LIG1-218ENST00000599322 INMTO95050 263 aa11.65□□□□□ -0.54
LIG1-218ENST00000599322 HCKP08631 526 aa11.65□□□□□ -0.54
LIG1-218ENST00000599322 FBP1P09467 338 aa11.65□□□□□ -0.54
LIG1-218ENST00000599322 SELLP14151 372 aa11.65□□□□□ -0.54
LIG1-218ENST00000599322 NANOS3P60323 173 aaKnown RBP11.65□□□□□ -0.54
LIG1-218ENST00000599322 RPL31P62899 125 aaKnown RBP11.65□□□□□ -0.54
LIG1-218ENST00000599322 SLC9A3R2Q15599 337 aa11.65□□□□□ -0.54
LIG1-218ENST00000599322 ZNF691Q5VV52 312 aa11.65□□□□□ -0.54
LIG1-218ENST00000599322 RUSC1-AS1Q66K80 236 aa11.65□□□□□ -0.54
LIG1-218ENST00000599322 C16orf87Q6PH81 154 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms