RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 CALHM2Q9HA72 323 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 TMEM9BQ9NQ34 198 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 NECAP2Q9NVZ3 263 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 RASL12Q9NYN1 266 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 AK3Q9UIJ7 227 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 MEMO1Q9Y316 297 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 CSAG2Q9Y5P2 127 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 POM121CA8CG34 1229 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 KRBOX1C9JBD0 128 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 CTSDP07339 412 aaPredicted RBP16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 EDN3P14138 238 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 PI3P19957 117 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 ZP3P21754 424 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 HES3Q5TGS1 186 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 DHRS13Q6UX07 377 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 HSD17B13Q7Z5P4 300 aaPredicted RBP16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 MCEMP1Q8IX19 187 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 OR1S1Q8NH92 325 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 DCUN1D4Q92564 292 aa16.61■□□□□ 0.25
PRKCSH-209ENST00000589838 NME2P1O60361 137 aa16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 ACTL6AO96019 429 aa16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 IFNA2P01563 188 aa16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 ZNF806P0C7X5 589 aa16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 PET100P0DJ07 73 aa16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 NME2P22392 152 aa16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 ARR3P36575 388 aa16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 PMELP40967 661 aa16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 LUMP51884 338 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 MALLQ13021 153 aa16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 ANKRD55Q3KP44 614 aa16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 SGPP2Q8IWX5 399 aa16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 EIF4E3Q8N5X7 224 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 OR51F2Q8NH61 342 aa16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 APH1AQ96BI3 265 aa16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 CYYR1Q96J86 154 aa16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 C1orf123Q9NWV4 160 aa16.6■□□□□ 0.25
PRKCSH-209ENST00000589838 F5H0A9 414 aaPredicted RBP16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 OR5H8P0DN80 308 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 RBMXP38159 391 aaKnown RBP16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 MEOX1P50221 254 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 DECR2Q9NUI1 292 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 IL17BQ9UHF5 180 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 ST3GAL6Q9Y274 331 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 IGKV1D-8A0A087WSZ0 117 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 TEX13DA0A0J9YY54 714 aaPredicted RBP16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 FCGR3AP08637 254 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 LYL1P12980 280 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 CD46P15529 392 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 RPS2P15880 293 aaKnown RBP16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 SLC10A1Q14973 349 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 BEX5Q5H9J7 111 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 PRSS54Q6PEW0 395 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 FBXL14Q8N1E6 418 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 IL22RA1Q8N6P7 574 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 MDS2Q8NDY4 140 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 FNDC9Q8TBE3 224 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 HDHD3Q9BSH5 251 aaPredicted RBP16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 REPIN1Q9BWE0 567 aaKnown RBP16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 DNTTIP1Q9H147 329 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 KCNMB2Q9Y691 235 aa16.59■□□□□ 0.25
PRKCSH-209ENST00000589838 IGKV1-12A0A0C4DH73 117 aa16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 ZNF850A8MQ14 1090 aa16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 A8MXK9 166 aa16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 PDCD6O75340 191 aa16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 ADAP1O75689 374 aa16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 KNG1P01042 644 aa16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 IGKV1D-12P01611 117 aa16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 PPIAP62937 165 aaKnown RBP16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 DHRS11Q6UWP2 260 aa16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 DPPA2Q7Z7J5 298 aa16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 OR10AD1Q8NGE0 317 aa16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 APOBEC3DQ96AK3 386 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 SULT4A1Q9BR01 284 aa16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 RNF126Q9BV68 326 aa16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 WDR13Q9H1Z4 485 aa16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 NARFLQ9H6Q4 476 aa16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 ACKR4Q9NPB9 350 aa16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 R4GN57 208 aa16.58■□□□□ 0.24
PRKCSH-209ENST00000589838 PRSS44E7EML9 344 aa16.57■□□□□ 0.24
PRKCSH-209ENST00000589838 GEMIN2O14893 280 aaKnown RBP16.57■□□□□ 0.24
PRKCSH-209ENST00000589838 FGF2P09038 288 aa16.57■□□□□ 0.24
PRKCSH-209ENST00000589838 PRSS12P56730 875 aa16.57■□□□□ 0.24
PRKCSH-209ENST00000589838 PLP2Q04941 152 aa16.57■□□□□ 0.24
PRKCSH-209ENST00000589838 OPA3Q9H6K4 179 aa16.57■□□□□ 0.24
PRKCSH-209ENST00000589838 ZNF286AQ9HBT8 521 aa16.57■□□□□ 0.24
PRKCSH-209ENST00000589838 A0A096LPE4 126 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 A0A1W2PPZ6 126 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 FAM90A10PA6NDY2 464 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 FAM90A18PA6NE21 464 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 FAM90A16PA6NEW6 464 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 FAM90A20PA6NIJ5 464 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 FAM90A8PA6NJQ4 464 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 FAM90A7PA6NKC0 464 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 FAM90A22PA8MWA6 464 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 FAM90A12PA8MX19 464 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 FAM90A5PA8MXJ8 464 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 FAM90A23PA8MXZ1 464 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 FAM90A15PP0C7V4 464 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 FAM90A13PP0C7W8 464 aa16.56■□□□□ 0.24
PRKCSH-209ENST00000589838 FAM90A14PP0C7W9 464 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms