RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 SFRP4Q6FHJ7 346 aaPredicted RBP16.41■□□□□ 0.22
CIRBP-220ENST00000588917 GDPGP1Q6ZNW5 385 aa16.41■□□□□ 0.22
CIRBP-220ENST00000588917 CEP19Q96LK0 163 aa16.41■□□□□ 0.22
CIRBP-220ENST00000588917 SPACA5Q96QH8 159 aa16.41■□□□□ 0.22
CIRBP-220ENST00000588917 NRIP2Q9BQI9 281 aa16.41■□□□□ 0.22
CIRBP-220ENST00000588917 IGHV4-61A0A0C4DH41 118 aa16.4■□□□□ 0.22
CIRBP-220ENST00000588917 C3orf80F5H4A9 247 aa16.4■□□□□ 0.22
CIRBP-220ENST00000588917 H7C1Q1 480 aa16.4■□□□□ 0.22
CIRBP-220ENST00000588917 NXPH2O95156 264 aa16.4■□□□□ 0.22
CIRBP-220ENST00000588917 CALRP27797 417 aaKnown RBP16.4■□□□□ 0.22
CIRBP-220ENST00000588917 BMXP51813 675 aa16.4■□□□□ 0.22
CIRBP-220ENST00000588917 SMIM21Q3B7S5 101 aa16.4■□□□□ 0.22
CIRBP-220ENST00000588917 FIP1L1Q6UN15 594 aaKnown RBP16.4■□□□□ 0.22
CIRBP-220ENST00000588917 DCDC5Q6ZRR9 648 aa16.4■□□□□ 0.22
CIRBP-220ENST00000588917 DEFB108BQ8NET1 73 aa16.4■□□□□ 0.22
CIRBP-220ENST00000588917 PXT1Q8NFP0 134 aa16.4■□□□□ 0.22
CIRBP-220ENST00000588917 CLDND2Q8NHS1 167 aa16.4■□□□□ 0.22
CIRBP-220ENST00000588917 TMEM246Q9BRR3 403 aa16.4■□□□□ 0.22
CIRBP-220ENST00000588917 UQCC2Q9BRT2 126 aa16.4■□□□□ 0.22
CIRBP-220ENST00000588917 DNTTIP1Q9H147 329 aa16.4■□□□□ 0.22
CIRBP-220ENST00000588917 MTCH1Q9NZJ7 389 aa16.4■□□□□ 0.22
CIRBP-220ENST00000588917 TANC2Q9HCD6 1990 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 TRAV1-2A0A0B4J238 106 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 PDCD5O14737 125 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 ZNF205O95201 554 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 PLATP00750 562 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 INHBBP09529 407 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 SMIM18P0DKX4 95 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 MYL9P24844 172 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 CD80P33681 288 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 PTGFRP43088 359 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 ERVK11-1P61568 191 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 FAM201AQ5SY85 155 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 FAM27D1Q5T7N8 215 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 NLRC3Q7RTR2 1065 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 JAGN1Q8N5M9 183 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 TNFAIP8L1Q8WVP5 186 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 RFT1Q96AA3 541 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 SMR3AQ99954 134 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 PPIL3Q9H2H8 161 aaKnown RBP16.39■□□□□ 0.21
CIRBP-220ENST00000588917 PATZ1Q9HBE1 687 aaKnown RBP16.39■□□□□ 0.21
CIRBP-220ENST00000588917 SMURF1Q9HCE7 757 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 EXOSC4Q9NPD3 245 aaKnown RBP16.39■□□□□ 0.21
CIRBP-220ENST00000588917 NLKQ9UBE8 527 aa16.39■□□□□ 0.21
CIRBP-220ENST00000588917 CHD3Q12873 2000 aaKnown RBP16.39■□□□□ 0.21
CIRBP-220ENST00000588917 A0A096LNT2 108 aa16.38■□□□□ 0.21
CIRBP-220ENST00000588917 SPRY1O43609 319 aaPredicted RBP16.38■□□□□ 0.21
CIRBP-220ENST00000588917 ZNF780AO75290 641 aaPredicted RBP16.38■□□□□ 0.21
CIRBP-220ENST00000588917 EGR1P18146 543 aa16.38■□□□□ 0.21
CIRBP-220ENST00000588917 ZP1P60852 638 aa16.38■□□□□ 0.21
CIRBP-220ENST00000588917 LMO4P61968 165 aa16.38■□□□□ 0.21
CIRBP-220ENST00000588917 GPR176Q14439 515 aa16.38■□□□□ 0.21
CIRBP-220ENST00000588917 ATPAF1Q5TC12 328 aaPredicted RBP16.38■□□□□ 0.21
CIRBP-220ENST00000588917 ASCL4Q6XD76 172 aa16.38■□□□□ 0.21
CIRBP-220ENST00000588917 ACP7Q6ZNF0 438 aa16.38■□□□□ 0.21
CIRBP-220ENST00000588917 SLC36A1Q7Z2H8 476 aa16.38■□□□□ 0.21
CIRBP-220ENST00000588917 LRRTM1Q86UE6 522 aa16.38■□□□□ 0.21
CIRBP-220ENST00000588917 SLAMF9Q96A28 289 aa16.38■□□□□ 0.21
CIRBP-220ENST00000588917 COX4I2Q96KJ9 171 aa16.38■□□□□ 0.21
CIRBP-220ENST00000588917 NARFLQ9H6Q4 476 aa16.38■□□□□ 0.21
CIRBP-220ENST00000588917 ZNF665Q9H7R5 613 aa16.38■□□□□ 0.21
CIRBP-220ENST00000588917 HES4Q9HCC6 221 aa16.38■□□□□ 0.21
CIRBP-220ENST00000588917 TXNL4BQ9NX01 149 aaKnown RBP16.38■□□□□ 0.21
CIRBP-220ENST00000588917 GHRLQ9UBU3 117 aa16.38■□□□□ 0.21
CIRBP-220ENST00000588917 GLS2Q9UI32 602 aa16.38■□□□□ 0.21
CIRBP-220ENST00000588917 OR2AT4A6NND4 320 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.37■□□□□ 0.21
CIRBP-220ENST00000588917 KDM4BO94953 1096 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 KNG1P01042 644 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 GZMKP49863 264 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 GMFBP60983 142 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 RSU1Q15404 277 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 C22orf42Q6IC83 251 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 Q71RC1 249 aaPredicted RBP16.37■□□□□ 0.21
CIRBP-220ENST00000588917 C19orf18Q8NEA5 215 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 OR5D18Q8NGL1 313 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 NEIL1Q96FI4 390 aaPredicted RBP16.37■□□□□ 0.21
CIRBP-220ENST00000588917 MED30Q96HR3 178 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 KCTD7Q96MP8 289 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 FAM192AQ9GZU8 254 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 METTL9Q9H1A3 318 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 WDR13Q9H1Z4 485 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 OR51E2Q9H255 320 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 SEBOXQ9HB31 216 aaPredicted RBP16.37■□□□□ 0.21
CIRBP-220ENST00000588917 KAAG1Q9UBP8 84 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 SCOCQ9UIL1 159 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 ING4Q9UNL4 249 aa16.37■□□□□ 0.21
CIRBP-220ENST00000588917 CEACAM18A8MTB9 384 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 TNFRSF13BO14836 293 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-220ENST00000588917 WNT9BO14905 357 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 SMAD7O15105 426 aaKnown RBP16.36■□□□□ 0.21
CIRBP-220ENST00000588917 ANGPTL7O43827 346 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 IGHV2-5P01817 119 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 GYPAP02724 150 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 CSTBP04080 98 aaKnown RBP16.36■□□□□ 0.21
CIRBP-220ENST00000588917 WNT2P09544 360 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 CD37P11049 281 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 RPS2P15880 293 aaKnown RBP16.36■□□□□ 0.21
CIRBP-220ENST00000588917 GADD45AP24522 165 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 NPY4RP50391 375 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms