RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 NOP16Q9Y3C1 178 aaKnown RBP16.98■□□□□ 0.31
TRIM47-204ENST00000587339 C16orf97H3BN30 126 aa16.97■□□□□ 0.31
TRIM47-204ENST00000587339 BOLA2-SMG1P6H3BVE0 249 aa16.97■□□□□ 0.31
TRIM47-204ENST00000587339 GEMIN2O14893 280 aaKnown RBP16.97■□□□□ 0.31
TRIM47-204ENST00000587339 CRYAAP02489 173 aa16.97■□□□□ 0.31
TRIM47-204ENST00000587339 ZNF718Q3SXZ3 478 aa16.97■□□□□ 0.31
TRIM47-204ENST00000587339 HAGHLQ6PII5 290 aaPredicted RBP16.97■□□□□ 0.31
TRIM47-204ENST00000587339 OR51S1Q8NGJ8 323 aa16.97■□□□□ 0.31
TRIM47-204ENST00000587339 ST8SIA4Q92187 359 aa16.97■□□□□ 0.31
TRIM47-204ENST00000587339 DMRTA2Q96SC8 542 aa16.97■□□□□ 0.31
TRIM47-204ENST00000587339 MICU1Q9BPX6 476 aa16.97■□□□□ 0.31
TRIM47-204ENST00000587339 USB1Q9BQ65 265 aaKnown RBP16.97■□□□□ 0.31
TRIM47-204ENST00000587339 MED19A0JLT2 244 aaPredicted RBP16.96■□□□□ 0.31
TRIM47-204ENST00000587339 M0QYG6 137 aa16.96■□□□□ 0.31
TRIM47-204ENST00000587339 NDUFB6O95139 128 aa16.96■□□□□ 0.31
TRIM47-204ENST00000587339 CD74P04233 296 aa16.96■□□□□ 0.31
TRIM47-204ENST00000587339 GCH1P30793 250 aa16.96■□□□□ 0.31
TRIM47-204ENST00000587339 FABP6P51161 128 aa16.96■□□□□ 0.31
TRIM47-204ENST00000587339 RBMS2Q15434 407 aaKnown RBP16.96■□□□□ 0.31
TRIM47-204ENST00000587339 SIGIRRQ6IA17 410 aa16.96■□□□□ 0.31
TRIM47-204ENST00000587339 OR52W1Q6IF63 320 aa16.96■□□□□ 0.31
TRIM47-204ENST00000587339 ST6GALNAC3Q8NDV1 305 aa16.96■□□□□ 0.31
TRIM47-204ENST00000587339 Q8NFD4 153 aa16.96■□□□□ 0.31
TRIM47-204ENST00000587339 CYYR1Q96J86 154 aa16.96■□□□□ 0.31
TRIM47-204ENST00000587339 ADAT1Q9BUB4 502 aaKnown RBP16.96■□□□□ 0.31
TRIM47-204ENST00000587339 OR10A4Q9H209 315 aa16.96■□□□□ 0.31
TRIM47-204ENST00000587339 PURGQ9UJV8 347 aaKnown RBP16.96■□□□□ 0.31
TRIM47-204ENST00000587339 MEMO1Q9Y316 297 aa16.96■□□□□ 0.31
TRIM47-204ENST00000587339 SPTA1P02549 2419 aa16.96■□□□□ 0.31
TRIM47-204ENST00000587339 TRAPPC2LH3BP13 241 aa16.96■□□□□ 0.3
TRIM47-204ENST00000587339 BCL3P20749 454 aa16.96■□□□□ 0.3
TRIM47-204ENST00000587339 CCKARP32238 428 aa16.96■□□□□ 0.3
TRIM47-204ENST00000587339 RBM11P57052 281 aaKnown RBP16.96■□□□□ 0.3
TRIM47-204ENST00000587339 BATF2Q8N1L9 274 aa16.96■□□□□ 0.3
TRIM47-204ENST00000587339 OCSTAMPQ9BR26 566 aa16.96■□□□□ 0.3
TRIM47-204ENST00000587339 TINAGL1Q9GZM7 467 aaPredicted RBP16.96■□□□□ 0.3
TRIM47-204ENST00000587339 MTCH1Q9NZJ7 389 aa16.96■□□□□ 0.3
TRIM47-204ENST00000587339 HSF4Q9ULV5 492 aa16.96■□□□□ 0.3
TRIM47-204ENST00000587339 FLVCR2Q9UPI3 526 aa16.96■□□□□ 0.3
TRIM47-204ENST00000587339 TMEM8BA6NDV4 472 aa16.95■□□□□ 0.3
TRIM47-204ENST00000587339 HMX3A6NHT5 357 aa16.95■□□□□ 0.3
TRIM47-204ENST00000587339 PEX14O75381 377 aa16.95■□□□□ 0.3
TRIM47-204ENST00000587339 CCNKO75909 580 aa16.95■□□□□ 0.3
TRIM47-204ENST00000587339 AMY2AP04746 511 aa16.95■□□□□ 0.3
TRIM47-204ENST00000587339 CBX5P45973 191 aa16.95■□□□□ 0.3
TRIM47-204ENST00000587339 LY6DQ14210 128 aa16.95■□□□□ 0.3
TRIM47-204ENST00000587339 MEF2DQ14814 521 aa16.95■□□□□ 0.3
TRIM47-204ENST00000587339 RNASE10Q5GAN6 216 aaKnown RBP16.95■□□□□ 0.3
TRIM47-204ENST00000587339 MBNL2Q5VZF2 373 aaKnown RBP16.95■□□□□ 0.3
TRIM47-204ENST00000587339 ELP2Q6IA86 826 aa16.95■□□□□ 0.3
TRIM47-204ENST00000587339 OR8G5Q8NG78 346 aa16.95■□□□□ 0.3
TRIM47-204ENST00000587339 OR51I2Q9H344 312 aa16.95■□□□□ 0.3
TRIM47-204ENST00000587339 TMEM100Q9NV29 134 aa16.95■□□□□ 0.3
TRIM47-204ENST00000587339 PRR14LQ5THK1 2151 aa16.95■□□□□ 0.3
TRIM47-204ENST00000587339 A0A0A6YYJ9 748 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 SYNGR1O43759 233 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 TIMM8AO60220 97 aaPredicted RBP16.94■□□□□ 0.3
TRIM47-204ENST00000587339 CA11O75493 328 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 TRAPPC2P0DI81 140 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 TRAPPC2BP0DI82 140 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 PLA2G5P39877 138 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 FGF12P61328 243 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 IL24Q13007 206 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 C22orf34Q6ZV56 151 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 OR10AD1Q8NGE0 317 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 GIMAP1Q8WWP7 306 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 FBXW5Q969U6 566 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 POM121Q96HA1 1249 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 GINS4Q9BRT9 223 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 PKIBQ9C010 78 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 ZNF581Q9P0T4 197 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 POU2F3Q9UKI9 436 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 FZR1Q9UM11 496 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 PLEKHA6Q9Y2H5 1048 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 SPEF1Q9Y4P9 236 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 ARPC1BO15143 372 aaKnown RBP16.94■□□□□ 0.3
TRIM47-204ENST00000587339 TBPP20226 339 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 KITLGP21583 273 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 CHATP28329 748 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 CA7P43166 264 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 OR8G1Q15617 311 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 FAM76BQ5HYJ3 339 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 RGS7BPQ6MZT1 257 aaPredicted RBP16.94■□□□□ 0.3
TRIM47-204ENST00000587339 BPIFB2Q8N4F0 458 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 RADILQ96JH8 1075 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 FAAP24Q9BTP7 215 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 ANAPC10Q9UM13 185 aa16.94■□□□□ 0.3
TRIM47-204ENST00000587339 C7orf66A4D0T2 115 aa16.93■□□□□ 0.3
TRIM47-204ENST00000587339 LRP5LA4QPB2 252 aa16.93■□□□□ 0.3
TRIM47-204ENST00000587339 F8VVB4 439 aa16.93■□□□□ 0.3
TRIM47-204ENST00000587339 F8VWA3 439 aa16.93■□□□□ 0.3
TRIM47-204ENST00000587339 OR7C1O76099 320 aaPredicted RBP16.93■□□□□ 0.3
TRIM47-204ENST00000587339 MPZP25189 248 aa16.93■□□□□ 0.3
TRIM47-204ENST00000587339 HRH1P35367 487 aa16.93■□□□□ 0.3
TRIM47-204ENST00000587339 NKPD1Q17RQ9 610 aa16.93■□□□□ 0.3
TRIM47-204ENST00000587339 SNAPC3Q92966 411 aa16.93■□□□□ 0.3
TRIM47-204ENST00000587339 FAM210AQ96ND0 272 aa16.93■□□□□ 0.3
TRIM47-204ENST00000587339 NPDC1Q9NQX5 325 aaPredicted RBP16.93■□□□□ 0.3
TRIM47-204ENST00000587339 SCP2D1Q9UJQ7 156 aa16.93■□□□□ 0.3
TRIM47-204ENST00000587339 DISC1C4P0D8 188 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms