RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 MAP1AP78559 2803 aaPredicted RBP8.92□□□□□ -0.98
LIG3-203ENST00000585370 DOCK7Q96N67 2140 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 PQLC2LA1A4F0 135 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 FAM90A10PA6NDY2 464 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 FAM90A18PA6NE21 464 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 FAM90A16PA6NEW6 464 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 FAM90A20PA6NIJ5 464 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 FAM90A8PA6NJQ4 464 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 FAM90A7PA6NKC0 464 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 FAM90A22PA8MWA6 464 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 FAM90A12PA8MX19 464 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 FAM90A5PA8MXJ8 464 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 FAM90A23PA8MXZ1 464 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 SMPD2O60906 423 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 HTR3BO95264 441 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 MT-ND4P03905 459 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 CD74P04233 296 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 H2AFB2P0C5Z0 115 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 FAM90A15PP0C7V4 464 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 FAM90A13PP0C7W8 464 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 FAM90A14PP0C7W9 464 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 FAM90A24PP0C7X0 464 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 ZNF35P13682 527 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 COX6B1P14854 86 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 HIST1H1DP16402 221 aaKnown RBP8.92□□□□□ -0.98
LIG3-203ENST00000585370 AGAP20933 346 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 PMELP40967 661 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 GNG2P59768 71 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 ZMYND11Q15326 602 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 TATDN3Q17R31 274 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 MOGAT2Q3SYC2 334 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 ACTBL2Q562R1 376 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 ELP2Q6IA86 826 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 STEAP1BQ6NZ63 245 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 NCCRP1Q6ZVX7 275 aaPredicted RBP8.92□□□□□ -0.98
LIG3-203ENST00000585370 C1QL2Q7Z5L3 287 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 AKAP14Q86UN6 197 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 ZNF573Q86YE8 665 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 MS4A3Q96HJ5 214 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 MED30Q96HR3 178 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 LURAP1Q96LR2 239 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 Q96M66 194 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 NKX3-1Q99801 234 aaPredicted RBP8.92□□□□□ -0.98
LIG3-203ENST00000585370 OCSTAMPQ9BR26 566 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 BANF2Q9H503 90 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 HSF4Q9ULV5 492 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 SPEF1Q9Y4P9 236 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 SLC25A15Q9Y619 301 aa8.92□□□□□ -0.98
LIG3-203ENST00000585370 RTTNQ86VV8 2226 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 IGKV1-27A0A075B6S5 117 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 TMEM235A6NFC5 223 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 FOXI3A8MTJ6 420 aaPredicted RBP8.91□□□□□ -0.98
LIG3-203ENST00000585370 A8MXE2 369 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 IQCF6A8MYZ5 107 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 ZNF736B4DX44 427 aaPredicted RBP8.91□□□□□ -0.98
LIG3-203ENST00000585370 DISC1C4P0D8 188 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 RAB3DO95716 219 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 PTHLHP12272 177 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 NAT1P18440 290 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 SERPINA2P20848 420 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 MPZP25189 248 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 BLVRBP30043 206 aaPredicted RBP8.91□□□□□ -0.98
LIG3-203ENST00000585370 TMEM50BP56557 158 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 GNG3P63215 75 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 HLXQ14774 488 aaPredicted RBP8.91□□□□□ -0.98
LIG3-203ENST00000585370 RBMS2Q15434 407 aaKnown RBP8.91□□□□□ -0.98
LIG3-203ENST00000585370 ZNF474Q6S9Z5 364 aaPredicted RBP8.91□□□□□ -0.98
LIG3-203ENST00000585370 ZNF782Q6ZMW2 699 aaPredicted RBP8.91□□□□□ -0.98
LIG3-203ENST00000585370 RNF144BQ7Z419 303 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 TRAPPC6BQ86SZ2 158 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 OSR2Q8N2R0 312 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 OR5D18Q8NGL1 313 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 OR51F2Q8NH61 342 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 OR5P3Q8WZ94 311 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 GCDHQ92947 438 aaPredicted RBP8.91□□□□□ -0.98
LIG3-203ENST00000585370 UPRTQ96BW1 309 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 CMBLQ96DG6 245 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 RNF170Q96K19 258 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 MICU1Q9BPX6 476 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 SLC25A21Q9BQT8 299 aaPredicted RBP8.91□□□□□ -0.98
LIG3-203ENST00000585370 PKIBQ9C010 78 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 PLK3Q9H4B4 646 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 IFT46Q9NQC8 304 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 MCUBQ9NWR8 336 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 SCP2D1Q9UJQ7 156 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 PLEKHA6Q9Y2H5 1048 aa8.91□□□□□ -0.98
LIG3-203ENST00000585370 ZNF469Q96JG9 3925 aaPredicted RBP8.9□□□□□ -0.98
LIG3-203ENST00000585370 A0A0A6YYD4 124 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 C7orf66A4D0T2 115 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 ZNF732B4DXR9 585 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 MFNGO00587 321 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 SOCS1O15524 211 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 PEX14O75381 377 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 CCNKO75909 580 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 NDUFB6O95139 128 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 CLDN14O95500 239 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 IL5P05113 134 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 CELA3BP08861 270 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 GNB3P16520 340 aa8.9□□□□□ -0.98
LIG3-203ENST00000585370 MECP2P51608 486 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms