RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 ZCCHC24Q8N2G6 241 aaKnown RBP13.63□□□□□ -0.23
SS18-226ENST00000585241 RAB40AQ8WXH6 277 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 SLAMF9Q96A28 289 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 CEP19Q96LK0 163 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 TM2D1Q9BX74 207 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 TMEM59Q9BXS4 323 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 HES4Q9HCC6 221 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 GCM1Q9NP62 436 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 ADAM30Q9UKF2 790 aa13.63□□□□□ -0.23
SS18-226ENST00000585241 CHD3Q12873 2000 aaKnown RBP13.63□□□□□ -0.23
SS18-226ENST00000585241 A0A1W2PP11 408 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 A6NLC8 198 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 SRRM5B3KS81 715 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 TRAPPC2LH3BP13 241 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 OVOL3O00110 214 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 RGS5O15539 181 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 EIF4EP06730 217 aaKnown RBP13.62□□□□□ -0.23
SS18-226ENST00000585241 MGMTP16455 207 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 BCL3P20749 454 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 SERPINA2P20848 420 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 TNFSF8P32971 234 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 S100A5P33763 92 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 NPBWR2P48146 333 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 ART1P52961 327 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 FGF12P61328 243 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 RPS27AP62979 156 aaKnown RBP13.62□□□□□ -0.23
SS18-226ENST00000585241 CCL8P80075 99 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 FAM189A2Q15884 450 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 ZNF826PQ6ZT77 177 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 BIVMQ86UB2 503 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 CCDC190Q86UF4 302 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 MOGAT3Q86VF5 341 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 OR51T1Q8NGJ9 327 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 OR10K1Q8NGX5 313 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 Q96M66 194 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 LPAR5Q9H1C0 372 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 SAP30LQ9HAJ7 183 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 DECR2Q9NUI1 292 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 UFSP2Q9NUQ7 469 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 C1orf123Q9NWV4 160 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 LAMP3Q9UQV4 416 aa13.62□□□□□ -0.23
SS18-226ENST00000585241 FASNP49327 2511 aaKnown RBP13.61□□□□□ -0.23
SS18-226ENST00000585241 DSCAMO60469 2012 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 IGHV3-64DA0A0J9YX35 117 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 F8VVB4 439 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 F8VWA3 439 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 IFNL4K9M1U5 179 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 AKR7A2O43488 359 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 HTR3BO95264 441 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 MPIG6BO95866 241 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 LHBP01229 141 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 CSTBP04080 98 aaKnown RBP13.61□□□□□ -0.23
SS18-226ENST00000585241 GTF2F2P13984 249 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 ELK1P19419 428 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 COL8A1P27658 744 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 CMTM4Q8IZR5 234 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 OSR2Q8N2R0 312 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 FAM89BQ8N5H3 189 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 NEU4Q8WWR8 484 aaPredicted RBP13.61□□□□□ -0.23
SS18-226ENST00000585241 SOSTQ9BQB4 213 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 NUDT16L1Q9BRJ7 211 aaKnown RBP13.61□□□□□ -0.23
SS18-226ENST00000585241 CACNG6Q9BXT2 260 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 RAB1BQ9H0U4 201 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 ELL3Q9HB65 397 aaPredicted RBP13.61□□□□□ -0.23
SS18-226ENST00000585241 HMG20AQ9NP66 347 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 RBFOX1Q9NWB1 397 aaKnown RBP13.61□□□□□ -0.23
SS18-226ENST00000585241 TANC2Q9HCD6 1990 aa13.61□□□□□ -0.23
SS18-226ENST00000585241 A0A0A6YYH2 397 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 FAM90A10PA6NDY2 464 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 FAM90A18PA6NE21 464 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 FAM90A16PA6NEW6 464 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 FAM90A20PA6NIJ5 464 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 A6NJ64 397 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 FAM90A8PA6NJQ4 464 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 FAM90A7PA6NKC0 464 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 FOXI3A8MTJ6 420 aaPredicted RBP13.6□□□□□ -0.23
SS18-226ENST00000585241 FAM90A22PA8MWA6 464 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 FAM90A12PA8MX19 464 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 FAM90A5PA8MXJ8 464 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 FAM90A23PA8MXZ1 464 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 CRTAPO75718 401 aaPredicted RBP13.6□□□□□ -0.23
SS18-226ENST00000585241 SCGNO76038 276 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 TPPPO94811 219 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 INHBBP09529 407 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 FAM90A15PP0C7V4 464 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 FAM90A13PP0C7W8 464 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 FAM90A14PP0C7W9 464 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 FAM90A24PP0C7X0 464 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 SSTR2P30874 369 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 MNDAP41218 407 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 MRPS11P82912 194 aaKnown RBP13.6□□□□□ -0.23
SS18-226ENST00000585241 GCSAMQ8N6F7 178 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 LRRC29Q8WV35 223 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 HPS1Q92902 700 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 FAM46BQ96A09 425 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 ZNF488Q96MN9 340 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 URM1Q9BTM9 101 aaKnown RBP13.6□□□□□ -0.23
SS18-226ENST00000585241 BANF2Q9H503 90 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 AKIP1Q9NQ31 210 aa13.6□□□□□ -0.23
SS18-226ENST00000585241 RASL12Q9NYN1 266 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms