RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	UTS2B	Q765I0	119 aa		10.35	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	CALHM1	Q8IU99	346 aa		10.35	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	SYS1	Q8N2H4	156 aa		10.35	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	PRSS35	Q8N3Z0	413 aa		10.35	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	DYRK2	Q92630	601 aa		10.35	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	UBE2F	Q969M7	185 aa		10.35	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	DPAGT1	Q9H3H5	408 aa		10.35	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	NEK6	Q9HC98	313 aa		10.35	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	MRPS18A	Q9NVS2	196 aa	Known RBP	10.35	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	FAM96B	Q9Y3D0	163 aa		10.35	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	LOC100130705	A0A1B0GUX0	176 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	LOC107986453	A0A1B0GWG9	222 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708		A0A1W2PQ09	198 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	SYNGR1	O43759	233 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	HTR1A	P08908	422 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	FBP1	P09467	338 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	SELL	P14151	372 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	KIR3DL2	P43630	455 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	GALE	Q14376	348 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	UBE2V2	Q15819	145 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	ZSCAN26	Q16670	478 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	TP53I3	Q53FA7	332 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	KLHL22	Q53GT1	634 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	LPCAT4	Q643R3	524 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	RUSC1-AS1	Q66K80	236 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	MKX	Q8IYA7	352 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	ENTHD1	Q8IYW4	607 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	FGFRL1	Q8N441	504 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708		Q8N7P7	452 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	ZNRF1	Q8ND25	227 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	TMEM185A	Q8NFB2	350 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	TNFRSF14	Q92956	283 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	STMN2	Q93045	179 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	RNF166	Q96A37	237 aa	Predicted RBP	10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	SPSB1	Q96BD6	273 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	LGALS12	Q96DT0	336 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	BORCS8	Q96FH0	119 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	CEP19	Q96LK0	163 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	DUX5	Q96PT3	197 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	SLITRK2	Q9H156	845 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	RHOF	Q9HBH0	211 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	FRRS1L	Q9P0K9	344 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	HHLA2	Q9UM44	414 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	RPL36	Q9Y3U8	105 aa	Known RBP	10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	PKD1L1	Q8TDX9	2849 aa		10.34	□□□□□ -0.75
CDK5RAP3-222	ENST00000581708	MDFIC2	A0A1B0GVS7	189 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	FAM230A	A0A1W2PPH8	454 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	NDUFA7	O95182	113 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	CYB5A	P00167	134 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	IGHA1	P01876	353 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	MT-ND2	P03891	347 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	CRYBA1	P05813	215 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	CHRM2	P08172	466 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	DBT	P11182	482 aa	Known RBP	10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	IER3	P46695	156 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	RBP2	P50120	134 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ATP1B3	P54709	279 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	OR12D2	P58182	307 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	RPL31	P62899	125 aa	Known RBP	10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ZNF91	Q05481	1191 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	MIDN	Q504T8	468 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	FIP1L1	Q6UN15	594 aa	Known RBP	10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	CD177	Q8N6Q3	437 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	OR4F5	Q8NH21	305 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	SLC29A1	Q99808	456 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	JAM3	Q9BX67	310 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	FAM118A	Q9NWS6	357 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	SF3B6	Q9Y3B4	125 aa	Known RBP	10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	SOX21	Q9Y651	276 aa	Predicted RBP	10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	MGAM2	Q2M2H8	2515 aa		10.33	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708		A0A0U1RQK1	487 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	FAM181B	A6NEQ2	426 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708		A6NIN4	97 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	OR4C45	A6NMZ5	311 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708		H0YAE9	185 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	RNASEK-C17orf49	H0YIS7	233 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708		K7N7A8	449 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	NPFF	O15130	113 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ALX3	O95076	343 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	RBP4	P02753	201 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	TK1	P04183	234 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	CCDC159	P0C7I6	412 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ZNF20	P17024	532 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	CAPZA1	P52907	286 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ALKBH1	Q13686	389 aa	Known RBP	10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ODF4	Q2M2E3	257 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	DMRTC1	Q5HYR2	192 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	GDPGP1	Q6ZNW5	385 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	LHFPL2	Q6ZUX7	228 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ANGPTL5	Q86XS5	388 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	PIP4P2	Q8N4L2	257 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	PACRGL	Q8N7B6	248 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	ZNF555	Q8NEP9	628 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	OR5R1	Q8NH85	324 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	PELI1	Q96FA3	418 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	C4orf36	Q96KX1	117 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	HEXA-AS1	Q9H8Q6	139 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	BEX1	Q9HBH7	125 aa		10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	SMPD3	Q9NY59	655 aa	Predicted RBP	10.32	□□□□□ -0.76
CDK5RAP3-222	ENST00000581708	MTCH1	Q9NZJ7	389 aa		10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms