RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 PRSS3P35030 304 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 FAUP35544 74 aaKnown RBP8.69□□□□□ -1.02
SS18-210ENST00000578700 RBP2P50120 134 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 FUT6P51993 359 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 FAM3AP98173 230 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 ZNF92Q03936 586 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 HGFACQ04756 655 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 OR8B8Q15620 311 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 RNASE12Q5GAN4 147 aaKnown RBP8.69□□□□□ -1.02
SS18-210ENST00000578700 PLCXD3Q63HM9 321 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 PLET1Q6UQ28 207 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 DNM1P46Q6ZS02 220 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 BHLHA15Q7RTS1 189 aaPredicted RBP8.69□□□□□ -1.02
SS18-210ENST00000578700 IZUMO1Q8IYV9 350 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 OR5AS1Q8N127 324 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 GABRG1Q8N1C3 465 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 OR4D6Q8NGJ1 314 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 NPRL2Q8WTW4 380 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 TNFAIP8L1Q8WVP5 186 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 PIGCQ92535 297 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 USB1Q9BQ65 265 aaKnown RBP8.69□□□□□ -1.02
SS18-210ENST00000578700 SOX7Q9BT81 388 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 ELL3Q9HB65 397 aaPredicted RBP8.69□□□□□ -1.02
SS18-210ENST00000578700 TUBG2Q9NRH3 451 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 GPR173Q9NS66 373 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 PTTG3PQ9NZH4 202 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 FBLN5Q9UBX5 448 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 LPAR3Q9UBY5 353 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 POU2F3Q9UKI9 436 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 ING4Q9UNL4 249 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 FAM230AA0A1W2PPH8 454 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 C5orf63A6NC05 138 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 NAP1L6A6NFF2 107 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 GMDSO60547 372 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 ZNF780AO75290 641 aaPredicted RBP8.68□□□□□ -1.02
SS18-210ENST00000578700 CRTAPO75718 401 aaPredicted RBP8.68□□□□□ -1.02
SS18-210ENST00000578700 RBBP9O75884 186 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 CYB5AP00167 134 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 CSTBP04080 98 aaKnown RBP8.68□□□□□ -1.02
SS18-210ENST00000578700 CSF1P09603 554 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 CD3GP09693 182 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 TMEM225BP0DP42 221 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 CCL2P13500 99 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 ZNF16P17020 682 aaPredicted RBP8.68□□□□□ -1.02
SS18-210ENST00000578700 PTGFRP43088 359 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 RAD52P43351 418 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 IDH3GP51553 393 aaPredicted RBP8.68□□□□□ -1.02
SS18-210ENST00000578700 ACTBP60709 375 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 ACTG1P63261 375 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 SSBP1Q04837 148 aaKnown RBP8.68□□□□□ -1.02
SS18-210ENST00000578700 GK2Q14410 553 aaPredicted RBP8.68□□□□□ -1.02
SS18-210ENST00000578700 ARL6IP1Q15041 203 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 UBE2V2Q15819 145 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 AGAP6Q5VW22 663 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 CCBE1Q6UXH8 406 aaPredicted RBP8.68□□□□□ -1.02
SS18-210ENST00000578700 MOB3CQ70IA8 216 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 GDPD3Q7L5L3 318 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 NRARPQ7Z6K4 114 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 C1orf174Q8IYL3 243 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 ZNF525Q8N782 197 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 CHST4Q8NCG5 386 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 OR56B1Q8NGI3 324 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 DEDD2Q8WXF8 326 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 MUCL1Q96DR8 90 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 PAPOLGQ9BWT3 736 aaKnown RBP8.68□□□□□ -1.02
SS18-210ENST00000578700 TMEM59Q9BXS4 323 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 C11orf54Q9H0W9 315 aaPredicted RBP8.68□□□□□ -1.02
SS18-210ENST00000578700 METTL9Q9H1A3 318 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 SCPEP1Q9HB40 452 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 NOX3Q9HBY0 568 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 RBFOX1Q9NWB1 397 aaKnown RBP8.68□□□□□ -1.02
SS18-210ENST00000578700 TBC1D24Q9ULP9 559 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 NOP16Q9Y3C1 178 aaKnown RBP8.68□□□□□ -1.02
SS18-210ENST00000578700 CACNG2Q9Y698 323 aa8.68□□□□□ -1.02
SS18-210ENST00000578700 HEATR1Q9H583 2144 aaKnown RBP8.68□□□□□ -1.02
SS18-210ENST00000578700 IGKV1-9A0A0C4DH69 117 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 ZNF503-AS2A6NEH8 195 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 OR5H1A6NKK0 313 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 SHISA9B4DS77 424 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 SULT1C2O00338 296 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 ABCD4O14678 606 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 LDLRAD4O15165 306 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 MPIG6BO95866 241 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 IGHV4-31P0DP07 118 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 VSIG8P0DPA2 414 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 ZNF14P17017 642 aaPredicted RBP8.67□□□□□ -1.02
SS18-210ENST00000578700 ACKR3P25106 362 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 OR3A4PP47883 348 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 EFNB2P52799 333 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 DSCR9P59020 149 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 DGCR2P98153 550 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 LOXL1Q08397 574 aaPredicted RBP8.67□□□□□ -1.02
SS18-210ENST00000578700 DYRK1AQ13627 763 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 PPA1Q15181 289 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 RSU1Q15404 277 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 RSBN1Q5VWQ0 802 aaPredicted RBP8.67□□□□□ -1.02
SS18-210ENST00000578700 TMEM42Q69YG0 159 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 SSX8Q7RTT4 187 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 DTX2Q86UW9 622 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 LYPD6Q86Y78 171 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms