RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 KRT77Q7Z794 578 aa12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 OR5M8Q8NGP6 311 aa12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 INTS14Q96SY0 518 aa12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 CLEC7AQ9BXN2 247 aa12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 TMEM133Q9H2Q1 129 aa12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 PAPOLBQ9NRJ5 636 aaKnown RBP12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 DPM3Q9P2X0 92 aa12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 SCOCQ9UIL1 159 aa12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 LINC00527Q9UJ94 153 aa12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 SLC22A13Q9Y226 551 aa12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 ZNF256Q9Y2P7 627 aaPredicted RBP12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 SEC14L6B5MCN3 397 aa12.85□□□□□ -0.35
CTDNEP1-211ENST00000575783 NME4O00746 187 aa12.85□□□□□ -0.35
CTDNEP1-211ENST00000575783 HAAOP46952 286 aa12.85□□□□□ -0.35
CTDNEP1-211ENST00000575783 ARHGDIBP52566 201 aa12.85□□□□□ -0.35
CTDNEP1-211ENST00000575783 SF3A3Q12874 501 aaKnown RBP eCLIP12.85□□□□□ -0.35
CTDNEP1-211ENST00000575783 EDDM3AQ14507 147 aa12.85□□□□□ -0.35
CTDNEP1-211ENST00000575783 SNAPC1Q16533 368 aa12.85□□□□□ -0.35
CTDNEP1-211ENST00000575783 ZBTB49Q6ZSB9 765 aa12.85□□□□□ -0.35
CTDNEP1-211ENST00000575783 ARPINQ7Z6K5 226 aa12.85□□□□□ -0.35
CTDNEP1-211ENST00000575783 OR8B12Q8NGG6 310 aa12.85□□□□□ -0.35
CTDNEP1-211ENST00000575783 OR4P4Q8NGL7 312 aa12.85□□□□□ -0.35
CTDNEP1-211ENST00000575783 NMNAT2Q9BZQ4 307 aa12.85□□□□□ -0.35
CTDNEP1-211ENST00000575783 ZMAT4Q9H898 229 aa12.85□□□□□ -0.35
CTDNEP1-211ENST00000575783 CDH10Q9Y6N8 788 aa12.85□□□□□ -0.35
CTDNEP1-211ENST00000575783 V9GYQ6 96 aa12.85□□□□□ -0.35
CTDNEP1-211ENST00000575783 M0QZK8 103 aa12.84□□□□□ -0.35
CTDNEP1-211ENST00000575783 BLVRAP53004 296 aa12.84□□□□□ -0.35
CTDNEP1-211ENST00000575783 DEFB136Q30KP8 78 aa12.84□□□□□ -0.35
CTDNEP1-211ENST00000575783 TCF23Q7RTU1 214 aa12.84□□□□□ -0.35
CTDNEP1-211ENST00000575783 CHPT1Q8WUD6 406 aa12.84□□□□□ -0.35
CTDNEP1-211ENST00000575783 THEM6Q8WUY1 208 aa12.84□□□□□ -0.35
CTDNEP1-211ENST00000575783 CITED4Q96RK1 184 aa12.84□□□□□ -0.35
CTDNEP1-211ENST00000575783 KCTD14Q9BQ13 255 aaPredicted RBP12.84□□□□□ -0.35
CTDNEP1-211ENST00000575783 NRIP2Q9BQI9 281 aa12.84□□□□□ -0.35
CTDNEP1-211ENST00000575783 SIKE1Q9BRV8 207 aa12.84□□□□□ -0.35
CTDNEP1-211ENST00000575783 SAR1AQ9NR31 198 aa12.84□□□□□ -0.35
CTDNEP1-211ENST00000575783 INTS9Q9NV88 658 aaKnown RBP12.84□□□□□ -0.35
CTDNEP1-211ENST00000575783 hADV38S2A0JD32 116 aa12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 SERPINE3A8MV23 424 aa12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 J3QT63 122 aa12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 GSC2O15499 205 aa12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 EDF1O60869 148 aaKnown RBP12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 NOS1APO75052 506 aaPredicted RBP12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 GSTT1P30711 240 aa12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 LINC01590Q5TEZ4 76 aa12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 RPL13AP3Q6NVV1 102 aa12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 SHFQ7M4L6 423 aa12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 COMMD2Q86X83 199 aa12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 ZNF573Q86YE8 665 aa12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 ABHD12Q8N2K0 398 aa12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 TPRX1Q8N7U7 411 aa12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 OR8D4Q8NGM9 314 aa12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 OTULINQ96BN8 352 aa12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 MRGBPQ9NV56 204 aa12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 POLDIP2Q9Y2S7 368 aa12.83□□□□□ -0.36
CTDNEP1-211ENST00000575783 LEUTXA8MZ59 168 aa12.82□□□□□ -0.36
CTDNEP1-211ENST00000575783 MMP23AO75900 390 aa12.82□□□□□ -0.36
CTDNEP1-211ENST00000575783 SLC35B1P78383 322 aa12.82□□□□□ -0.36
CTDNEP1-211ENST00000575783 MEF2CQ06413 473 aaPredicted RBP12.82□□□□□ -0.36
CTDNEP1-211ENST00000575783 RIPPLY1Q0D2K3 151 aa12.82□□□□□ -0.36
CTDNEP1-211ENST00000575783 ZNF260Q3ZCT1 412 aa12.82□□□□□ -0.36
CTDNEP1-211ENST00000575783 BAIAP2L2Q6UXY1 529 aa12.82□□□□□ -0.36
CTDNEP1-211ENST00000575783 LCNL1Q6ZST4 164 aa12.82□□□□□ -0.36
CTDNEP1-211ENST00000575783 TSSK6Q9BXA6 273 aa12.82□□□□□ -0.36
CTDNEP1-211ENST00000575783 MED20Q9H944 212 aa12.82□□□□□ -0.36
CTDNEP1-211ENST00000575783 DCAF13Q9NV06 445 aaKnown RBP12.82□□□□□ -0.36
CTDNEP1-211ENST00000575783 HHLA2Q9UM44 414 aa12.82□□□□□ -0.36
CTDNEP1-211ENST00000575783 SAMD4AQ9UPU9 718 aaKnown RBP12.82□□□□□ -0.36
CTDNEP1-211ENST00000575783 PIGLQ9Y2B2 252 aa12.82□□□□□ -0.36
CTDNEP1-211ENST00000575783 LYVE1Q9Y5Y7 322 aa12.82□□□□□ -0.36
CTDNEP1-211ENST00000575783 PLECQ15149 4684 aaKnown RBP12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 PSMD9O00233 223 aa12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 ZNF737O75373 536 aa12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 LYNP07948 512 aa12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 ZNF684Q5T5D7 378 aa12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 GLYATQ6IB77 296 aa12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 ASRGL1Q7L266 308 aa12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 KRT74Q7RTS7 529 aa12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 OR4Q3Q8NH05 313 aa12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 RP9Q8TA86 221 aaKnown RBP12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 DCLRE1BQ9H816 532 aa12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 NIPAL2Q9H841 368 aa12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 HES4Q9HCC6 221 aa12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 TAS2R1Q9NYW7 299 aa12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 IL20Q9NYY1 176 aa12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 MOB4Q9Y3A3 225 aa12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 HSPE1-MOB4S4R3N1 261 aa12.81□□□□□ -0.36
CTDNEP1-211ENST00000575783 FAM172BPA6NC97 362 aa12.8□□□□□ -0.36
CTDNEP1-211ENST00000575783 FAM183AA6NL82 134 aa12.8□□□□□ -0.36
CTDNEP1-211ENST00000575783 NRASP01111 189 aa12.8□□□□□ -0.36
CTDNEP1-211ENST00000575783 FAM106CPP0CH98 169 aa12.8□□□□□ -0.36
CTDNEP1-211ENST00000575783 H2AFXP16104 143 aaPredicted RBP12.8□□□□□ -0.36
CTDNEP1-211ENST00000575783 RRM2P31350 389 aa12.8□□□□□ -0.36
CTDNEP1-211ENST00000575783 PSMA6P60900 246 aaKnown RBP12.8□□□□□ -0.36
CTDNEP1-211ENST00000575783 BDH1Q02338 343 aa12.8□□□□□ -0.36
CTDNEP1-211ENST00000575783 TRAPPC6BQ86SZ2 158 aa12.8□□□□□ -0.36
CTDNEP1-211ENST00000575783 OR8H2Q8N162 312 aa12.8□□□□□ -0.36
CTDNEP1-211ENST00000575783 COMMD1Q8N668 190 aa12.8□□□□□ -0.36
CTDNEP1-211ENST00000575783 OR8U1Q8NH10 309 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms