RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 TLNRD1Q9H1K6 362 aa4.69□□□□□ -1.66
SMG6-219ENST00000575663 WDR13Q9H1Z4 485 aa4.69□□□□□ -1.66
SMG6-219ENST00000575663 ABCB9Q9NP78 766 aa4.69□□□□□ -1.66
SMG6-219ENST00000575663 C19orf12Q9NSK7 152 aa4.69□□□□□ -1.66
SMG6-219ENST00000575663 LRRC42Q9Y546 428 aa4.69□□□□□ -1.66
SMG6-219ENST00000575663 HILPDAQ9Y5L2 63 aa4.69□□□□□ -1.66
SMG6-219ENST00000575663 MINOS1-NBL1R4GNA1 71 aa4.69□□□□□ -1.66
SMG6-219ENST00000575663 TCRBV5S2A0A599 114 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 SNTNA6NMZ2 147 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 SEC14L6B5MCN3 397 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 H3BNX3 289 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 M0QZK8 103 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 SLC1A7O00341 560 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 SOCS2O14508 198 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 AKR7A2O43488 359 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 SLC25A17O43808 307 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 OR2F2O95006 317 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 NDUFB2O95178 105 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 TFF1P04155 84 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 FRMD6-AS1P0C7T7 363 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 CCL3L1P16619 93 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 TNFRSF1BP20333 461 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 CFL1P23528 166 aaKnown RBP4.68□□□□□ -1.66
SMG6-219ENST00000575663 BRS3P32247 399 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 MAGEA2P43356 314 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 GPR4P46093 362 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 VEGFCP49767 419 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 ENTPD1P49961 510 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 SELENOWP63302 87 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 SLC35B1P78383 322 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 PRKCDQ05655 676 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 COTL1Q14019 142 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 SEC23BQ15437 767 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 TIGD6Q17RP2 521 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 MAJINQ3KP22 176 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 ZBED5Q49AG3 693 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 IGSF11Q5DX21 431 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 C9orf152Q5JTZ5 239 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 FAM27D1Q5T7N8 215 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 ZNF770Q6IQ21 691 aaPredicted RBP4.68□□□□□ -1.66
SMG6-219ENST00000575663 KCTD8Q6ZWB6 473 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 TMPRSS11FQ6ZWK6 438 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 CBLL1Q75N03 491 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 NAA40Q86UY6 237 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 CALHM1Q8IU99 346 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 ZNF695Q8IW36 515 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 ADGRG5Q8IZF4 528 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 RNF113BQ8IZP6 322 aaKnown RBP4.68□□□□□ -1.66
SMG6-219ENST00000575663 RNF148Q8N7C7 305 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 OR4Q3Q8NH05 313 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 ENKURQ8TC29 256 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 CHPT1Q8WUD6 406 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 PYURFQ96I23 114 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 RDH12Q96NR8 316 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 COPS4Q9BT78 406 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 EDA2RQ9HAV5 297 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 IL1RAPQ9NPH3 570 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 PNRC2Q9NPJ4 139 aaKnown RBP4.68□□□□□ -1.66
SMG6-219ENST00000575663 DNAJB9Q9UBS3 223 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 CYB5R1Q9UHQ9 305 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 KCNG2Q9UJ96 466 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 LYVE1Q9Y5Y7 322 aa4.68□□□□□ -1.66
SMG6-219ENST00000575663 SIRT4Q9Y6E7 314 aaPredicted RBP4.68□□□□□ -1.66
SMG6-219ENST00000575663 IGKV1D-17A0A075B6S4 117 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 IGLV1-36A0A0B4J1U3 117 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 FAM90A22PA8MWA6 464 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 CCL24O00175 119 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 CDC42EP2O14613 210 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 ST8SIA5O15466 376 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 TBX1O43435 398 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 KRT36O76013 467 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 RENP00797 406 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 RBP4P02753 201 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 IGHV1-8P0DP01 117 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 CTRB1P17538 263 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 PRKACAP17612 351 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 ATP6V1B2P21281 511 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 OTX1P32242 354 aaPredicted RBP4.67□□□□□ -1.66
SMG6-219ENST00000575663 OR3A4PP47883 348 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 OR1E2P47887 323 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 INSL3P51460 131 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 SMIM11AP58511 58 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 S100A12P80511 92 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 FHL1Q13642 323 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 ZNF273Q14593 569 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 TRAM2Q15035 370 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 ATP6AP1Q15904 470 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 SNAPC1Q16533 368 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 ZNF260Q3ZCT1 412 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 OGFRL1Q5TC84 451 aaPredicted RBP4.67□□□□□ -1.66
SMG6-219ENST00000575663 TMEM200BQ69YZ2 307 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 CTRB2Q6GPI1 263 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 LIN54Q6MZP7 749 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 ZNF730Q6ZMV8 503 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 ZBTB49Q6ZSB9 765 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 PTCHD4Q6ZW05 846 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 RRM2BQ7LG56 351 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 OVCH2Q7RTZ1 564 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 THAP5Q7Z6K1 395 aa4.67□□□□□ -1.66
SMG6-219ENST00000575663 AKAP14Q86UN6 197 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms