RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 TGFBR3LH3BV60 316 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 PGA3P0DJD8 388 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 GP1BBP13224 206 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 MMP9P14780 707 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 CTLA4P16410 223 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 CD200P41217 278 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 P2RY1P47900 373 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 RND3P61587 244 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 PSG6Q00889 435 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 TLE1Q04724 770 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 MGAT2Q10469 447 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 ISXQ2M1V0 245 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 PRICKLE4Q2TBC4 344 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 DMRTA1Q5VZB9 504 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 PTCRAQ6ISU1 281 aaPredicted RBP8.45□□□□□ -1.06
CCDC40-212ENST00000574799 CBLN3Q6UW01 205 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 RTN4RL2Q86UN3 420 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 FAM160A2Q8N612 972 aaPredicted RBP8.45□□□□□ -1.06
CCDC40-212ENST00000574799 OR9A4Q8NGU2 314 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 TMEM230Q96A57 120 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 GNRHR2Q96P88 292 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 ADOQ96SZ5 270 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 TBL1XR1Q9BZK7 514 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 OR8D2Q9GZM6 311 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 OR10A2Q9H208 303 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 SUSD2Q9UGT4 822 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 NXT1Q9UKK6 140 aaKnown RBP8.45□□□□□ -1.06
CCDC40-212ENST00000574799 SEC16AO15027 2179 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 A0A1W2PP11 408 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 A0A1W2PPQ1 181 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 DEDDO75618 318 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 IGKV1D-16P01601 117 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 GSTP1P09211 210 aaKnown RBP8.45□□□□□ -1.06
CCDC40-212ENST00000574799 DRD1P21728 446 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 SFTPDP35247 375 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 NOVA1P51513 510 aaKnown RBP8.45□□□□□ -1.06
CCDC40-212ENST00000574799 POLR2HP52434 150 aaKnown RBP8.45□□□□□ -1.06
CCDC40-212ENST00000574799 PIGPP57054 158 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 BTG2P78543 158 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 MRPS21P82921 87 aaKnown RBP8.45□□□□□ -1.06
CCDC40-212ENST00000574799 FZD2Q14332 565 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 RNF151Q2KHN1 245 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 EMC4Q5J8M3 183 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 TSPO2Q5TGU0 170 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 LCN15Q6UWW0 184 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 OR2AJ1Q8NGZ0 328 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 STT3BQ8TCJ2 826 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 GPR119Q8TDV5 335 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 LANCL2Q9NS86 450 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 V9GYS6 101 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 C9J4A7 227 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 TCF21O43680 179 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 CST7O76096 145 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 HNRNPA2B1P22626 353 aaKnown RBP8.45□□□□□ -1.06
CCDC40-212ENST00000574799 TLE4Q04727 773 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 C1QL3Q5VWW1 255 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 Q6ZSR6 202 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 TIPARPQ7Z3E1 657 aaKnown RBP8.45□□□□□ -1.06
CCDC40-212ENST00000574799 OR13G1Q8NGZ3 307 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 FAM3CQ92520 227 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 WFIKKN1Q96NZ8 548 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 NEU1Q99519 415 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 VN1R1Q9GZP7 353 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 MAGT1Q9H0U3 335 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 FAM60AQ9NP50 221 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 PNO1Q9NRX1 252 aaKnown RBP8.45□□□□□ -1.06
CCDC40-212ENST00000574799 MMACHCQ9Y4U1 282 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 KIF26BQ2KJY2 2108 aa8.45□□□□□ -1.06
CCDC40-212ENST00000574799 FAM221AA4D161 298 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 FAM24AA6NFZ4 105 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 A8MWP6 167 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 ZNF264O43296 627 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 RPLP1P05386 114 aaKnown RBP8.44□□□□□ -1.06
CCDC40-212ENST00000574799 HPNP05981 417 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 OR5H8P0DN80 308 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 IL12BP29460 328 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 AKT2P31751 481 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 GABRA4P48169 554 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 HERV-K104P61576 105 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 PAX5Q02548 391 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 OR5I1Q13606 314 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 FHL1Q13642 323 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 HNF4GQ14541 408 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 ZNF542PQ5EBM4 170 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 CHRDL2Q6WN34 429 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 TDHQ8IZJ6 230 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 OR51E1Q8TCB6 317 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 PRTFDC1Q9NRG1 225 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 A6NNC1 897 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 CYR61O00622 381 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 PHF1O43189 567 aaPredicted RBP8.44□□□□□ -1.06
CCDC40-212ENST00000574799 GUCA1AP43080 201 aaPredicted RBP8.44□□□□□ -1.06
CCDC40-212ENST00000574799 RPL27P61353 136 aaKnown RBP8.44□□□□□ -1.06
CCDC40-212ENST00000574799 UNC119Q13432 240 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 JOSD1Q15040 202 aaPredicted RBP8.44□□□□□ -1.06
CCDC40-212ENST00000574799 CATSPERDQ86XM0 798 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 LGI3Q8N145 548 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 OR13D1Q8NGV5 346 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 MRGPRFQ96AM1 343 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 ELOVL1Q9BW60 279 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms