RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 TK1P04183 234 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 LPLP06858 475 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 LYNP07948 512 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 CHRM2P08172 466 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 ZNF3P17036 446 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 EDDM3BP56851 147 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 COL10A1Q03692 680 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 EDDM3AQ14507 147 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 CEACAM21Q3KPI0 293 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 ZNF626Q68DY1 528 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 ETV3LQ6ZN32 361 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 ANGPTL5Q86XS5 388 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 OTOSQ8NHW6 89 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 OR51E1Q8TCB6 317 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 GIPC3Q8TF64 312 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 DUX3Q96PT4 197 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 FEVQ99581 238 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 TEAD3Q99594 435 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 RGCCQ9H4X1 137 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 NIPAL2Q9H841 368 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 GPR84Q9NQS5 396 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 CMC2Q9NRP2 79 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 IL36RNQ9UBH0 155 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 DNAH7Q8WXX0 4024 aa11.87□□□□□ -0.51
USB1-214ENST00000568848 AQP12BA6NM10 295 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 SLC1A7O00341 560 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 NXPH2O95156 264 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 MRPL3P09001 348 aaKnown RBP11.86□□□□□ -0.51
USB1-214ENST00000568848 PGA5P0DJD9 388 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 CALCBP10092 127 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 HAAOP46952 286 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 SLC35A2P78381 396 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 UTF1Q5T230 341 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 PLEKHG7Q6ZR37 379 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 ASRGL1Q7L266 308 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 CENPVQ7Z7K6 275 aaPredicted RBP11.86□□□□□ -0.51
USB1-214ENST00000568848 SPATA24Q86W54 205 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 AQP12AQ8IXF9 295 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 HS3ST5Q8IZT8 346 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 FTMTQ8N4E7 242 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 LINC00482Q8N8I6 264 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 ASCC1Q8N9N2 400 aaKnown RBP11.86□□□□□ -0.51
USB1-214ENST00000568848 ZNF671Q8TAW3 534 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 FAM206AQ9NX38 181 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 PIGLQ9Y2B2 252 aa11.86□□□□□ -0.51
USB1-214ENST00000568848 GNGT2O14610 69 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 IFNGP01579 166 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 APOC1P02654 83 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 IGHV1-8P0DP01 117 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 PRKACGP22612 351 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 ACTA2P62736 377 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 ACTG2P63267 376 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 ACTC1P68032 377 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 ACTA1P68133 377 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 FLOT2Q14254 428 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 SMIM21Q3B7S5 101 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 DNAL1Q4LDG9 190 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 ABCA11PQ4W5N1 156 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 CALHM1Q8IU99 346 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 ZNF561Q8N587 486 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 NDNFQ8TB73 568 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 TRMT10AQ8TBZ6 339 aaKnown RBP11.85□□□□□ -0.51
USB1-214ENST00000568848 MALSU1Q96EH3 234 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 ASCL2Q99929 193 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 B9D2Q9BPU9 175 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 NRIP2Q9BQI9 281 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 ZNF649Q9BS31 505 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 COPS3Q9UNS2 423 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 POMPQ9Y244 141 aa11.85□□□□□ -0.51
USB1-214ENST00000568848 TBL2Q9Y4P3 447 aaKnown RBP11.85□□□□□ -0.51
USB1-214ENST00000568848 TMEM82A0PJX8 343 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 J3QT63 122 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 GSC2O15499 205 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 DNAJC8O75937 253 aaPredicted RBP11.84□□□□□ -0.51
USB1-214ENST00000568848 AMY1AP04745 511 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 AMY2AP04746 511 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 ZNF728P0DKX0 622 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 MAP2K3P46734 347 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 EGFEM1PQ0D2K5 195 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 C9orf152Q5JTZ5 239 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 CD300LDQ6UXZ3 194 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 SHFQ7M4L6 423 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 KRT77Q7Z794 578 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 MRPL41Q8IXM3 137 aaKnown RBP11.84□□□□□ -0.51
USB1-214ENST00000568848 OR13D1Q8NGV5 346 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 FOXRED1Q96CU9 486 aaPredicted RBP11.84□□□□□ -0.51
USB1-214ENST00000568848 RCC1LQ96I51 464 aaKnown RBP11.84□□□□□ -0.51
USB1-214ENST00000568848 CADM1Q9BY67 442 aaKnown RBP11.84□□□□□ -0.51
USB1-214ENST00000568848 CHST6Q9GZX3 395 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 PBOV1Q9GZY1 135 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 ABCB9Q9NP78 766 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 GTF2A1LQ9UNN4 478 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 BAIAP2Q9UQB8 552 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 SLC22A13Q9Y226 551 aa11.84□□□□□ -0.51
USB1-214ENST00000568848 TSSC4Q9Y5U2 329 aaPredicted RBP11.84□□□□□ -0.51
USB1-214ENST00000568848 KIAA2026Q5HYC2 2103 aa11.83□□□□□ -0.52
USB1-214ENST00000568848 TCRBV3S1A0A5B6 114 aa11.83□□□□□ -0.52
USB1-214ENST00000568848 OR5B21A6NL26 309 aa11.83□□□□□ -0.52
USB1-214ENST00000568848 H3BN98 237 aa11.83□□□□□ -0.52
USB1-214ENST00000568848 ZNF737O75373 536 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms