RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 ASRGL1Q7L266 308 aa12.39□□□□□ -0.43
PALB2-205ENST00000567003 CENPVQ7Z7K6 275 aaPredicted RBP12.39□□□□□ -0.43
PALB2-205ENST00000567003 OR10G2Q8NGC3 310 aa12.39□□□□□ -0.43
PALB2-205ENST00000567003 OR11H6Q8NGC7 330 aa12.39□□□□□ -0.43
PALB2-205ENST00000567003 RCC1LQ96I51 464 aaKnown RBP12.39□□□□□ -0.43
PALB2-205ENST00000567003 NRIP2Q9BQI9 281 aa12.39□□□□□ -0.43
PALB2-205ENST00000567003 RYR2Q92736 4967 aa12.39□□□□□ -0.43
PALB2-205ENST00000567003 TMEM269A0A1B0GVZ9 245 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 TCRBV5S2A0A599 114 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 A6NIN4 97 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 PRR23D1E9PI22 279 aaPredicted RBP12.38□□□□□ -0.43
PALB2-205ENST00000567003 K7N7A8 449 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 GSC2O15499 205 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 NRASP01111 189 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 IGLV3-1P01715 115 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 ALDOBP05062 364 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 MRPL3P09001 348 aaKnown RBP12.38□□□□□ -0.43
PALB2-205ENST00000567003 PRR23D2P0DMB1 279 aaPredicted RBP12.38□□□□□ -0.43
PALB2-205ENST00000567003 ALOX5APP20292 161 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 DYNLT3P51808 116 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 RPS7P62081 194 aaKnown RBP12.38□□□□□ -0.43
PALB2-205ENST00000567003 CALHM1Q8IU99 346 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 CPOQ8IVL8 374 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 NDNFQ8TB73 568 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 REEP1Q9H902 201 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 HES4Q9HCC6 221 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 ENPP5Q9UJA9 477 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 LAMP5Q9UJQ1 280 aa12.38□□□□□ -0.43
PALB2-205ENST00000567003 TSSC4Q9Y5U2 329 aaPredicted RBP12.38□□□□□ -0.43
PALB2-205ENST00000567003 PQLC2LA1A4F0 135 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 F8VVB4 439 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 F8VWA3 439 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 NOS1APO75052 506 aaPredicted RBP12.37□□□□□ -0.43
PALB2-205ENST00000567003 INMTO95050 263 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 ACTA2P62736 377 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 ACTG2P63267 376 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 ACTC1P68032 377 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 ACTA1P68133 377 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 EDDM3AQ14507 147 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 GINS1Q14691 196 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 OR2T5Q6IEZ7 315 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 BAIAP2L2Q6UXY1 529 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 ANGPTL5Q86XS5 388 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 DEFB107AQ8IZN7 70 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 TPRX1Q8N7U7 411 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 OR2T29Q8NH02 315 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 ZNF714Q96N38 554 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 FEVQ99581 238 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 B9D2Q9BPU9 175 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 FAM107BQ9H098 131 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 ARL8BQ9NVJ2 186 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 SLC22A13Q9Y226 551 aa12.37□□□□□ -0.43
PALB2-205ENST00000567003 IGHV2-26A0A0B4J1V2 119 aa12.36□□□□□ -0.43
PALB2-205ENST00000567003 TMEM82A0PJX8 343 aa12.36□□□□□ -0.43
PALB2-205ENST00000567003 FAM90A22PA8MWA6 464 aa12.36□□□□□ -0.43
PALB2-205ENST00000567003 ZNF737O75373 536 aa12.36□□□□□ -0.43
PALB2-205ENST00000567003 LPLP06858 475 aa12.36□□□□□ -0.43
PALB2-205ENST00000567003 CCDC159P0C7I6 412 aa12.36□□□□□ -0.43
PALB2-205ENST00000567003 ESRRGP62508 458 aa12.36□□□□□ -0.43
PALB2-205ENST00000567003 EGFEM1PQ0D2K5 195 aa12.36□□□□□ -0.43
PALB2-205ENST00000567003 ABCA11PQ4W5N1 156 aa12.36□□□□□ -0.43
PALB2-205ENST00000567003 ZNF573Q86YE8 665 aa12.36□□□□□ -0.43
PALB2-205ENST00000567003 ZNF676Q8N7Q3 588 aa12.36□□□□□ -0.43
PALB2-205ENST00000567003 LINC00482Q8N8I6 264 aa12.36□□□□□ -0.43
PALB2-205ENST00000567003 TRMT10AQ8TBZ6 339 aaKnown RBP12.36□□□□□ -0.43
PALB2-205ENST00000567003 BCAS4Q8TDM0 211 aa12.36□□□□□ -0.43
PALB2-205ENST00000567003 GTF2A1LQ9UNN4 478 aa12.36□□□□□ -0.43
PALB2-205ENST00000567003 COPS3Q9UNS2 423 aa12.36□□□□□ -0.43
PALB2-205ENST00000567003 POLDIP2Q9Y2S7 368 aa12.36□□□□□ -0.43
PALB2-205ENST00000567003 STAB2Q8WWQ8 2551 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 PRODHO43272 600 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 MMP23AO75900 390 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 DHRS3O75911 302 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 RBP4P02753 201 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 TTRP02766 147 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 ATP6V1B1P15313 513 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 SLC2A5P22732 501 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 ERVK11-1P61568 191 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 APOFQ13790 326 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 CLVS2Q5SYC1 327 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 MINOS1Q5TGZ0 78 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 CD300LDQ6UXZ3 194 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 ETV3LQ6ZN32 361 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 PLEKHG7Q6ZR37 379 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 GDPD3Q7L5L3 318 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 TMEM179BQ7Z7N9 219 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 ZNF649Q9BS31 505 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 ZNF446Q9NWS9 450 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 IL36RNQ9UBH0 155 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 NUFIP1Q9UHK0 495 aaKnown RBP12.35□□□□□ -0.43
PALB2-205ENST00000567003 SESN1Q9Y6P5 492 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 MINOS1-NBL1R4GNA1 71 aa12.35□□□□□ -0.43
PALB2-205ENST00000567003 FAM172BPA6NC97 362 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 ACOD1A6NK06 481 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 E9PQ18 207 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 H3BSH0 61 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 MAGEB4O15481 346 aaPredicted RBP12.34□□□□□ -0.43
PALB2-205ENST00000567003 CHRM2P08172 466 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 MPZP25189 248 aa12.34□□□□□ -0.43
PALB2-205ENST00000567003 AZGP1P25311 298 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms