RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 OR4C45A6NMZ5 311 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 OR2AT4A6NND4 320 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 E9PI62 339 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 HOXA3O43365 443 aaPredicted RBP11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 SYT7O43581 403 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 INMTO95050 263 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 ECDO95905 644 aaPredicted RBP11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 MMP9P14780 707 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 MYL12AP19105 171 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 TGM4P49221 684 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 CAPZA1P52907 286 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 ST3GAL4Q11206 333 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 ALKBH1Q13686 389 aaKnown RBP11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 SLC9A3R2Q15599 337 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 DGUOKQ16854 277 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 AWAT1Q58HT5 328 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 FAM76BQ5HYJ3 339 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 CLVS2Q5SYC1 327 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 C6orf141Q5SZD1 244 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 TMEM244Q5VVB8 128 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 VMO1Q7Z5L0 202 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 TMEM185AQ8NFB2 350 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 OR5A2Q8NGI9 324 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 ZNF671Q8TAW3 534 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 AQP3Q92482 292 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 C12orf43Q96C57 262 aaKnown RBP11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 SIRPDQ9H106 197 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 PLEKHA1Q9HB21 404 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 SLC25A10Q9UBX3 287 aaPredicted RBP11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 CLEC2DQ9UHP7 191 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 LOC107986453A0A1B0GWG9 222 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 A0A1W2PQ09 198 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 SYNGR1O43759 233 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 RRP9O43818 475 aaKnown RBP11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 HAAOP46952 286 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 CEBPDP49716 269 aaPredicted RBP11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 GBX2P52951 348 aaPredicted RBP11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 IL13RA1P78552 427 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 MED21Q13503 144 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 OR2G6Q5TZ20 316 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 TMPRSS11AQ6ZMR5 421 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 ZNF788Q6ZQV5 615 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 AHSA2Q719I0 299 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 RDH10Q8IZV5 341 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 OR52N1Q8NH53 320 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 ANGPTL6Q8NI99 470 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 GATAD2BQ8WXI9 593 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 SLC25A28Q96A46 364 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 DCTN5Q9BTE1 182 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 RAB26Q9ULW5 256 aa11.24□□□□□ -0.61
VPS9D1-204ENST00000565023 MEGF8Q7Z7M0 2845 aa11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 FAM230AA0A1W2PPH8 454 aa11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 SLC1A7O00341 560 aa11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 PSG2P11465 335 aa11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 OMGP23515 440 aa11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 C21orf33P30042 268 aaPredicted RBP11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 KLRD1Q13241 179 aa11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 PDCD1Q15116 288 aa11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 CCDC58Q4VC31 144 aa11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 C9orf139Q6ZV77 190 aa11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 ZNF485Q8NCK3 441 aa11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 ZNRF1Q8ND25 227 aa11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 RPS4Y2Q8TD47 263 aa11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 C10orf35Q96D05 121 aa11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 MED30Q96HR3 178 aa11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 CHCHD3Q9NX63 227 aaKnown RBP11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 BABAM2Q9NXR7 383 aa11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 OR14J1Q9UGF5 321 aa11.23□□□□□ -0.61
VPS9D1-204ENST00000565023 IGKV1D-17A0A075B6S4 117 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 IGHV1-69DA0A0B4J2H0 117 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 ANKRD61A6NGH8 418 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 TMEM212A6NML5 194 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 SIGLEC5O15389 551 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 ZFPL1O95159 310 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 IGHV1-69P01742 117 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 CDK1P06493 297 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 RNASE1P07998 156 aaKnown RBP11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 RPSAP08865 295 aaKnown RBP11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 ACAA1P09110 424 aaPredicted RBP11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 CCDC159P0C7I6 412 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 HKR1P10072 659 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 GTF2A1P52655 376 aaPredicted RBP11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 TUSC1Q2TAM9 212 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 ATPAF1Q5TC12 328 aaPredicted RBP11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 XAF1Q6GPH4 301 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 RPL22L1Q6P5R6 122 aaKnown RBP11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 ACP7Q6ZNF0 438 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 ANGPTL5Q86XS5 388 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 ZNF573Q86YE8 665 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 CMTM4Q8IZR5 234 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 FAM185AQ8N0U4 392 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 STX19Q8N4C7 294 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 ZNF676Q8N7Q3 588 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 POC1AQ8NBT0 407 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 LY6G5BQ8NDX9 201 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 OR10AC1Q8NH08 325 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 ZNF184Q99676 751 aaPredicted RBP11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 DNTTIP1Q9H147 329 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 ZMAT3Q9HA38 289 aaKnown RBP11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 SCN3BQ9NY72 215 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms