RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 ITFG2Q969R8 447 aa13.02□□□□□ -0.33
RNF40-205ENST00000563909 REEP6Q96HR9 211 aa13.02□□□□□ -0.33
RNF40-205ENST00000563909 C4orf36Q96KX1 117 aa13.02□□□□□ -0.33
RNF40-205ENST00000563909 GAR1Q9NY12 217 aaKnown RBP13.02□□□□□ -0.33
RNF40-205ENST00000563909 ZNF319Q9P2F9 582 aa13.02□□□□□ -0.33
RNF40-205ENST00000563909 NUFIP1Q9UHK0 495 aaKnown RBP13.02□□□□□ -0.33
RNF40-205ENST00000563909 BLOC1S6Q9UL45 172 aa13.02□□□□□ -0.33
RNF40-205ENST00000563909 GTF2A1LQ9UNN4 478 aa13.02□□□□□ -0.33
RNF40-205ENST00000563909 U3KQK5 164 aa13.02□□□□□ -0.33
RNF40-205ENST00000563909 DNAH1Q9P2D7 4330 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 A0A0U1RQV5 110 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 GGT3PA6NGU5 568 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 IQCF6A8MYZ5 107 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 FBXO24O75426 580 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 CDK1P06493 297 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 HTR1AP08908 422 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 CD28P10747 220 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 DDOSTP39656 456 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 PSMB10P40306 273 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 ETV1P50549 477 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 GBX2P52951 348 aaPredicted RBP13.01□□□□□ -0.33
RNF40-205ENST00000563909 MFGE8Q08431 387 aaPredicted RBP13.01□□□□□ -0.33
RNF40-205ENST00000563909 BCL2L15Q5TBC7 163 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 OR2T2Q6IF00 324 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 CATSPERDQ86XM0 798 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 ELMOD2Q8IZ81 293 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 RORBQ92753 470 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 CNTD2Q9H8S5 307 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 ERVK-18Q9QC07 812 aa13.01□□□□□ -0.33
RNF40-205ENST00000563909 ANOS1P23352 680 aa13□□□□□ -0.33
RNF40-205ENST00000563909 CRHBPP24387 322 aa13□□□□□ -0.33
RNF40-205ENST00000563909 C21orf33P30042 268 aaPredicted RBP13□□□□□ -0.33
RNF40-205ENST00000563909 PMELP40967 661 aa13□□□□□ -0.33
RNF40-205ENST00000563909 SLC35A2P78381 396 aa13□□□□□ -0.33
RNF40-205ENST00000563909 FAM3AP98173 230 aa13□□□□□ -0.33
RNF40-205ENST00000563909 GFOD2Q3B7J2 385 aa13□□□□□ -0.33
RNF40-205ENST00000563909 RNLSQ5VYX0 342 aa13□□□□□ -0.33
RNF40-205ENST00000563909 FDX2Q6P4F2 183 aa13□□□□□ -0.33
RNF40-205ENST00000563909 OR52N1Q8NH53 320 aa13□□□□□ -0.33
RNF40-205ENST00000563909 SPRYD4Q8WW59 207 aaPredicted RBP13□□□□□ -0.33
RNF40-205ENST00000563909 PELI1Q96FA3 418 aa13□□□□□ -0.33
RNF40-205ENST00000563909 YTHDF1Q9BYJ9 559 aaKnown RBP13□□□□□ -0.33
RNF40-205ENST00000563909 DUSP21Q9H596 190 aa13□□□□□ -0.33
RNF40-205ENST00000563909 ISG20L2Q9H9L3 353 aaKnown RBP13□□□□□ -0.33
RNF40-205ENST00000563909 ERGIC3Q9Y282 383 aa13□□□□□ -0.33
RNF40-205ENST00000563909 hCG_38984A0A1B0GV85 526 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 CD300LBA8K4G0 201 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 F5H5P2 479 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 MYL12BO14950 172 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 MLNRO43193 412 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 TTRP02766 147 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 ATP6V1B1P15313 513 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 CCR9P51686 369 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 VMO1Q7Z5L0 202 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 COMMD2Q86X83 199 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 NDUFA11Q86Y39 141 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 OR2G2Q8NGZ5 317 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 TMEM100Q9NV29 134 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 CTSZQ9UBR2 303 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 CLEC2DQ9UHP7 191 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 SLC22A13Q9Y226 551 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 LRRC42Q9Y546 428 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 LYSTQ99698 3801 aa12.99□□□□□ -0.33
RNF40-205ENST00000563909 ADARB2-AS1A8MUL3 147 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 RGS10O43665 173 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 MTRF1O75570 445 aaKnown RBP12.98□□□□□ -0.33
RNF40-205ENST00000563909 PAHP00439 452 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 IGLV3-1P01715 115 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 RPSAP08865 295 aaKnown RBP12.98□□□□□ -0.33
RNF40-205ENST00000563909 NHLRC4P0CG21 123 aaPredicted RBP12.98□□□□□ -0.33
RNF40-205ENST00000563909 IRF2P14316 349 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 EEF1B2P24534 225 aaKnown RBP12.98□□□□□ -0.33
RNF40-205ENST00000563909 TGM4P49221 684 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 GSK3AP49840 483 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 ALKBH1Q13686 389 aaKnown RBP12.98□□□□□ -0.33
RNF40-205ENST00000563909 WDR38Q5JTN6 314 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 CASC10Q5T4H9 136 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 OR2G6Q5TZ20 316 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 BHLHE23Q8NDY6 225 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 CCDC54Q8NEL0 328 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 CSNK2A3Q8NEV1 391 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 OR56B2PQ8NGI1 322 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 OR51E1Q8TCB6 317 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 NPRL2Q8WTW4 380 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 RNF166Q96A37 237 aaPredicted RBP12.98□□□□□ -0.33
RNF40-205ENST00000563909 LYZL4Q96KX0 146 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 CDCA4Q9BXL8 241 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 SLC22A4Q9H015 551 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 GPR84Q9NQS5 396 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 PAK1IP1Q9NWT1 392 aaPredicted RBP12.98□□□□□ -0.33
RNF40-205ENST00000563909 BABAM2Q9NXR7 383 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 NOP16Q9Y3C1 178 aaKnown RBP12.98□□□□□ -0.33
RNF40-205ENST00000563909 HYDINQ4G0P3 5121 aa12.98□□□□□ -0.33
RNF40-205ENST00000563909 A0A1B0GVI7 797 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 A0A1W2PRD5 423 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 A0A1W2PRF3 423 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 A0A1W2PRM7 423 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 ANKRD30BLA7E2S9 258 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 UBCP0CG48 685 aaKnown RBP12.97□□□□□ -0.33
RNF40-205ENST00000563909 MAP2K3P46734 347 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms