RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 NRIP2Q9BQI9 281 aa13.82□□□□□ -0.2
CLK3-210ENST00000563112 SLITRK2Q9H156 845 aa13.82□□□□□ -0.2
CLK3-210ENST00000563112 OR14J1Q9UGF5 321 aa13.82□□□□□ -0.2
CLK3-210ENST00000563112 SF3B6Q9Y3B4 125 aaKnown RBP13.82□□□□□ -0.2
CLK3-210ENST00000563112 A0A1W2PRD5 423 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 A0A1W2PRF3 423 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 A0A1W2PRM7 423 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 DAPL1A0PJW8 107 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 NDUFA7O95182 113 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 KNG1P01042 644 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 IGHV4-59P01825 116 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 ACSM1Q08AH1 577 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 IL24Q13007 206 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 KLRD1Q13241 179 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 OCLNQ16625 522 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 TMEM244Q5VVB8 128 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 ANGPTL5Q86XS5 388 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 CALHM1Q8IU99 346 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 PRSS35Q8N3Z0 413 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 CBR4Q8N4T8 237 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 TNFRSF14Q92956 283 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 BORCS8Q96FH0 119 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 C9orf16Q9BUW7 83 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 C1RLQ9NZP8 487 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 GMPPBQ9Y5P6 360 aa13.81□□□□□ -0.2
CLK3-210ENST00000563112 LOC107986453A0A1B0GWG9 222 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 hCG_1809904A0A1W2PP81 198 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 A0A1W2PPE2 198 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 A0A1W2PR64 198 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 A0A1W2PRV1 198 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 MEIOCA2RUB1 952 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 EBAG9O00559 213 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 GPR137BO60478 399 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 ISL1P61371 349 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 RPL31P62899 125 aaKnown RBP13.8□□□□□ -0.2
CLK3-210ENST00000563112 PRB3Q04118 309 aaPredicted RBP13.8□□□□□ -0.2
CLK3-210ENST00000563112 CNN3Q15417 329 aaKnown RBP13.8□□□□□ -0.2
CLK3-210ENST00000563112 UBE2V2Q15819 145 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 GDPGP1Q6ZNW5 385 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 C17orf107Q6ZR85 190 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 PP6455Q8WZ26 134 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 MRPL48Q96GC5 212 aaKnown RBP13.8□□□□□ -0.2
CLK3-210ENST00000563112 CHST5Q9GZS9 411 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 ZNF696Q9H7X3 374 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 HES4Q9HCC6 221 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 ZNRD1Q9P1U0 126 aa13.8□□□□□ -0.2
CLK3-210ENST00000563112 CLPSL1A2RUU4 121 aa13.79□□□□□ -0.2
CLK3-210ENST00000563112 HTR1AP08908 422 aa13.79□□□□□ -0.2
CLK3-210ENST00000563112 KIR3DL2P43630 455 aa13.79□□□□□ -0.2
CLK3-210ENST00000563112 CEBPDP49716 269 aaPredicted RBP13.79□□□□□ -0.2
CLK3-210ENST00000563112 ATP1B3P54709 279 aa13.79□□□□□ -0.2
CLK3-210ENST00000563112 DLX1P56177 255 aa13.79□□□□□ -0.2
CLK3-210ENST00000563112 ERVK11-1P61568 191 aa13.79□□□□□ -0.2
CLK3-210ENST00000563112 OLFML2AQ68BL7 652 aa13.79□□□□□ -0.2
CLK3-210ENST00000563112 BATF2Q8N1L9 274 aa13.79□□□□□ -0.2
CLK3-210ENST00000563112 OR2G2Q8NGZ5 317 aa13.79□□□□□ -0.2
CLK3-210ENST00000563112 CEP19Q96LK0 163 aa13.79□□□□□ -0.2
CLK3-210ENST00000563112 Q96MT0 163 aa13.79□□□□□ -0.2
CLK3-210ENST00000563112 FAM234AQ9H0X4 552 aa13.79□□□□□ -0.2
CLK3-210ENST00000563112 HEXA-AS1Q9H8Q6 139 aa13.79□□□□□ -0.2
CLK3-210ENST00000563112 C19orf12Q9NSK7 152 aa13.79□□□□□ -0.2
CLK3-210ENST00000563112 SLC16A6O15403 523 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 MPZL2O60487 215 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 CYB5AP00167 134 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 TK1P04183 234 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 CHRM2P08172 466 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 ZNF20P17024 532 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 SAA4P35542 130 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 ACTA2P62736 377 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 ACTG2P63267 376 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 MIDNQ504T8 468 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 PRR31Q5SQ13 230 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 TMEM200BQ69YZ2 307 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 EGFL6Q8IUX8 553 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 RDH10Q8IZV5 341 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 ACBD7Q8N6N7 88 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 DNAAF1Q8NEP3 725 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 OR5R1Q8NH85 324 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 S100A14Q9HCY8 104 aa13.78□□□□□ -0.2
CLK3-210ENST00000563112 J3QLW9 94 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 J3QRE1 110 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 ANGPTL7O43827 346 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 OCM2P0CE71 109 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 OCMP0CE72 109 aaPredicted RBP13.77□□□□□ -0.21
CLK3-210ENST00000563112 ZNF19P17023 458 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 PRKACBP22694 351 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 RBP2P50120 134 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 OR12D2P58182 307 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 RELBQ01201 579 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 FDX2Q6P4F2 183 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 ZBTB49Q6ZSB9 765 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 SLC25A26Q70HW3 274 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 MKXQ8IYA7 352 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 Q8IYB0 196 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 PNKDQ8N490 385 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 ASCC1Q8N9N2 400 aaKnown RBP13.77□□□□□ -0.21
CLK3-210ENST00000563112 OR4M1Q8NGD0 313 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 SLAMF9Q96A28 289 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 MTCH1Q9NZJ7 389 aa13.77□□□□□ -0.21
CLK3-210ENST00000563112 VPREB3Q9UKI3 123 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms