RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 GPR173Q9NS66 373 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 ACOXLQ9NUZ1 547 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 NLKQ9UBE8 527 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 A0A0U1RQK1 487 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 A0A1W2PPH5 198 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 H0YAE9 185 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 NOS1APO75052 506 aaPredicted RBP13.13□□□□□ -0.31
LMX1B-204ENST00000561065 NXPH2O95156 264 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 MYL12AP19105 171 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 OMGP23515 440 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 RBP2P50120 134 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 ATP1B3P54709 279 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 OR12D2P58182 307 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 RELBQ01201 579 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 BLMHQ13867 455 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 PDCD1Q15116 288 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 C16orf87Q6PH81 154 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 FIP1L1Q6UN15 594 aaKnown RBP13.13□□□□□ -0.31
LMX1B-204ENST00000561065 Q8N7P7 452 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 DNAAF1Q8NEP3 725 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 ZDHHC16Q969W1 377 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 C4orf36Q96KX1 117 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 DCTN5Q9BTE1 182 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 PKIBQ9C010 78 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 ELL3Q9HB65 397 aaPredicted RBP13.13□□□□□ -0.31
LMX1B-204ENST00000561065 AMBNQ9NP70 447 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 SIRT7Q9NRC8 400 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 ONECUT1Q9UBC0 465 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 ZNF222Q9UK12 451 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 KPTNQ9Y664 436 aa13.13□□□□□ -0.31
LMX1B-204ENST00000561065 MEGF8Q7Z7M0 2845 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 IGKV1D-17A0A075B6S4 117 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 LOC107986453A0A1B0GWG9 222 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 FAM230AA0A1W2PPH8 454 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 PQLC2LA1A4F0 135 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 FAM181BA6NEQ2 426 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 SLC1A7O00341 560 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 SPRY1O43609 319 aaPredicted RBP13.12□□□□□ -0.31
LMX1B-204ENST00000561065 IGHA1P01876 353 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 KLRD1Q13241 179 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 ALKBH1Q13686 389 aaKnown RBP13.12□□□□□ -0.31
LMX1B-204ENST00000561065 MKXQ8IYA7 352 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 Q8IYB0 196 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 PRSS35Q8N3Z0 413 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 POC1AQ8NBT0 407 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 OR5D14Q8NGL3 314 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 C8orf46Q8TAG6 207 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 CPNE2Q96FN4 548 aaPredicted RBP13.12□□□□□ -0.31
LMX1B-204ENST00000561065 CHST5Q9GZS9 411 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 FGF20Q9NP95 211 aaPredicted RBP13.12□□□□□ -0.31
LMX1B-204ENST00000561065 NOX4Q9NPH5 578 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 ERVK13-1Q9NX77 482 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 FRRS1LQ9P0K9 344 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 GLS2Q9UI32 602 aa13.12□□□□□ -0.31
LMX1B-204ENST00000561065 hCG_1809904A0A1W2PP81 198 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 A0A1W2PPE2 198 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 A0A1W2PR64 198 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 A0A1W2PRV1 198 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 TMEM212A6NML5 194 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 RNASEK-C17orf49H0YIS7 233 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 SIGLEC5O15389 551 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 CAV3P56539 151 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 IL24Q13007 206 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 CCDC58Q4VC31 144 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 ZNF691Q5VV52 312 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 SHISA2Q6UWI4 295 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 UTS2BQ765I0 119 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 C8orf59Q8N0T1 100 aaPredicted RBP13.11□□□□□ -0.31
LMX1B-204ENST00000561065 KIR3DL3Q8N743 410 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 OR52I1Q8NGK6 324 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 OR5AK2Q8NH90 309 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 SGMS2Q8NHU3 365 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 SPSB1Q96BD6 273 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 PELI1Q96FA3 418 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 ZNF488Q96MN9 340 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 JAM3Q9BX67 310 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 VCX3BQ9H321 246 aa13.11□□□□□ -0.31
LMX1B-204ENST00000561065 SLC25A10Q9UBX3 287 aaPredicted RBP13.11□□□□□ -0.31
LMX1B-204ENST00000561065 CAB39Q9Y376 341 aaPredicted RBP13.11□□□□□ -0.31
LMX1B-204ENST00000561065 IGHV4-59P01825 116 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 PGA5P0DJD9 388 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 PSG2P11465 335 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 NDUFB7P17568 137 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 MPZP25189 248 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 CAPZA1P52907 286 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 MTCP1P56278 107 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 ACP7Q6ZNF0 438 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 C1orf122Q6ZSJ8 110 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 LHFPL2Q6ZUX7 228 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 LDLRAD3Q86YD5 345 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 SERPINA12Q8IW75 414 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 ZNF561Q8N587 486 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 TMEM86BQ8N661 226 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 OR13C3Q8NGS6 347 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 H1FXQ92522 213 aaKnown RBP13.1□□□□□ -0.31
LMX1B-204ENST00000561065 TNFRSF14Q92956 283 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 FGGYQ96C11 551 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 C1RLQ9NZP8 487 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 MYRFQ9Y2G1 1151 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 EXOSC1Q9Y3B2 195 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms