RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 OR13C8Q8NGS7 320 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 OR4K15Q8NH41 348 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 DMRTA2Q96SC8 542 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 PECRQ9BY49 303 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 PCDHB16Q9NRJ7 776 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 EIF3KQ9UBQ5 218 aaKnown RBP15.35■□□□□ 0.05
SNX1-208ENST00000559844 C5orf49A4QMS7 147 aa15.34■□□□□ 0.05
SNX1-208ENST00000559844 CCNOP22674 350 aa15.34■□□□□ 0.05
SNX1-208ENST00000559844 HRH1P35367 487 aa15.34■□□□□ 0.05
SNX1-208ENST00000559844 RAP2BP61225 183 aa15.34■□□□□ 0.05
SNX1-208ENST00000559844 ATPAF1Q5TC12 328 aaPredicted RBP15.34■□□□□ 0.05
SNX1-208ENST00000559844 PLCXD3Q63HM9 321 aa15.34■□□□□ 0.05
SNX1-208ENST00000559844 NAXEQ8NCW5 288 aa15.34■□□□□ 0.05
SNX1-208ENST00000559844 PIGCQ92535 297 aa15.34■□□□□ 0.05
SNX1-208ENST00000559844 RAD51DO75771 328 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 SNAPC5O75971 98 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 OR2A4O95047 310 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 HTR3BO95264 441 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 CSN2P05814 226 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 OR4E1P0C645 316 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 FOXF2Q12947 444 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 GK2Q14410 553 aaPredicted RBP15.33■□□□□ 0.05
SNX1-208ENST00000559844 Q5BKY6 102 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 VAX1Q5SQQ9 334 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 TMEM211Q6ICI0 200 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 MUC20Q8N307 709 aaPredicted RBP15.33■□□□□ 0.05
SNX1-208ENST00000559844 PXT1Q8NFP0 134 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 OR2T35Q8NGX2 323 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 GRPEL2Q8TAA5 225 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 ASB13Q8WXK3 278 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 BCL2L2Q92843 193 aaPredicted RBP15.33■□□□□ 0.05
SNX1-208ENST00000559844 Q96M66 194 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 FAM210AQ96ND0 272 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 OR2A7Q96R45 310 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 REPIN1Q9BWE0 567 aaKnown RBP15.33■□□□□ 0.05
SNX1-208ENST00000559844 IL36GQ9NZH8 169 aa15.33■□□□□ 0.05
SNX1-208ENST00000559844 IGKV1-27A0A075B6S5 117 aa15.33■□□□□ 0.04
SNX1-208ENST00000559844 H3BUI4 141 aa15.33■□□□□ 0.04
SNX1-208ENST00000559844 CEACAM8P31997 349 aaPredicted RBP15.33■□□□□ 0.04
SNX1-208ENST00000559844 APLNRP35414 380 aa15.33■□□□□ 0.04
SNX1-208ENST00000559844 MRPL21Q7Z2W9 205 aaKnown RBP15.33■□□□□ 0.04
SNX1-208ENST00000559844 TMED4Q7Z7H5 227 aa15.33■□□□□ 0.04
SNX1-208ENST00000559844 RTN4RL2Q86UN3 420 aa15.33■□□□□ 0.04
SNX1-208ENST00000559844 ARRDC1Q8N5I2 433 aa15.33■□□□□ 0.04
SNX1-208ENST00000559844 CNEP1R1Q8N9A8 125 aa15.33■□□□□ 0.04
SNX1-208ENST00000559844 OR2AK2Q8NG84 335 aa15.33■□□□□ 0.04
SNX1-208ENST00000559844 ST8SIA4Q92187 359 aa15.33■□□□□ 0.04
SNX1-208ENST00000559844 SNAPC3Q92966 411 aa15.33■□□□□ 0.04
SNX1-208ENST00000559844 POM121L2Q96KW2 1035 aa15.33■□□□□ 0.04
SNX1-208ENST00000559844 CHST6Q9GZX3 395 aa15.33■□□□□ 0.04
SNX1-208ENST00000559844 A0A0G2JNJ9 132 aa15.32■□□□□ 0.04
SNX1-208ENST00000559844 ZNF503-AS2A6NEH8 195 aa15.32■□□□□ 0.04
SNX1-208ENST00000559844 IL18BPO95998 194 aa15.32■□□□□ 0.04
SNX1-208ENST00000559844 PMP2P02689 132 aa15.32■□□□□ 0.04
SNX1-208ENST00000559844 GSTT2P0CG29 244 aa15.32■□□□□ 0.04
SNX1-208ENST00000559844 MPPED2Q15777 294 aa15.32■□□□□ 0.04
SNX1-208ENST00000559844 HOGA1Q86XE5 327 aa15.32■□□□□ 0.04
SNX1-208ENST00000559844 CSNK2A3Q8NEV1 391 aa15.32■□□□□ 0.04
SNX1-208ENST00000559844 RND1Q92730 232 aa15.32■□□□□ 0.04
SNX1-208ENST00000559844 MRPS24Q96EL2 167 aaKnown RBP15.32■□□□□ 0.04
SNX1-208ENST00000559844 RADILQ96JH8 1075 aa15.32■□□□□ 0.04
SNX1-208ENST00000559844 CA10Q9NS85 328 aa15.32■□□□□ 0.04
SNX1-208ENST00000559844 Q9UFV3 132 aa15.32■□□□□ 0.04
SNX1-208ENST00000559844 AKR7A2O43488 359 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 SPRY1O43609 319 aaPredicted RBP15.31■□□□□ 0.04
SNX1-208ENST00000559844 PRSS12P56730 875 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 TAS2R46P59540 309 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 GUSBP1Q15486 140 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 FAM214BQ7L5A3 538 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 OR11H4Q8NGC9 324 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 FBXW5Q969U6 566 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 CHIAQ9BZP6 476 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 PIPOXQ9P0Z9 390 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 AMY2BP19961 511 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 PDZK1IP1Q13113 114 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 MICBQ29980 383 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 C4orf17Q53FE4 359 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 FAHD2BQ6P2I3 314 aaPredicted RBP15.31■□□□□ 0.04
SNX1-208ENST00000559844 SLC25A42Q86VD7 318 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 CCDC36Q8IYA8 594 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 FTMTQ8N4E7 242 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 C12orf45Q8N5I9 185 aaPredicted RBP15.31■□□□□ 0.04
SNX1-208ENST00000559844 ZSCAN4Q8NAM6 433 aaPredicted RBP15.31■□□□□ 0.04
SNX1-208ENST00000559844 OR56B2PQ8NGI1 322 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 OR5H2Q8NGV7 314 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 FAHD2AQ96GK7 314 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 POM121Q96HA1 1249 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 PLEKHJ1Q9NW61 149 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 HSF4Q9ULV5 492 aa15.31■□□□□ 0.04
SNX1-208ENST00000559844 ZNF850A8MQ14 1090 aa15.3■□□□□ 0.04
SNX1-208ENST00000559844 ANGPTL7O43827 346 aa15.3■□□□□ 0.04
SNX1-208ENST00000559844 TNFSF13O75888 250 aa15.3■□□□□ 0.04
SNX1-208ENST00000559844 CST4P01036 141 aa15.3■□□□□ 0.04
SNX1-208ENST00000559844 CRHP06850 196 aa15.3■□□□□ 0.04
SNX1-208ENST00000559844 GABRR1P24046 479 aa15.3■□□□□ 0.04
SNX1-208ENST00000559844 KIR2DL2P43627 348 aaPredicted RBP15.3■□□□□ 0.04
SNX1-208ENST00000559844 SNRPD2P62316 118 aaKnown RBP15.3■□□□□ 0.04
SNX1-208ENST00000559844 TGFBR3Q03167 851 aa15.3■□□□□ 0.04
SNX1-208ENST00000559844 HIKESHIQ53FT3 197 aa15.3■□□□□ 0.04
SNX1-208ENST00000559844 VWA1Q6PCB0 445 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms