RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 PHF21AQ96BD5 680 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 CCDC124Q96CT7 223 aaKnown RBP14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 ASB9Q96DX5 294 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 OR4F4Q96R69 305 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 CITED2Q99967 270 aaPredicted RBP14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 ABCB10Q9NRK6 738 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 GPR173Q9NS66 373 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 PQLC2LA1A4F0 135 aa14.75□□□□□ -0.05
VIPAS39-209ENST00000556909 ZNF254O75437 659 aa14.75□□□□□ -0.05
VIPAS39-209ENST00000556909 RIDAP52758 137 aaKnown RBP14.75□□□□□ -0.05
VIPAS39-209ENST00000556909 CLVS2Q5SYC1 327 aa14.75□□□□□ -0.05
VIPAS39-209ENST00000556909 ZNF626Q68DY1 528 aa14.75□□□□□ -0.05
VIPAS39-209ENST00000556909 TMEM42Q69YG0 159 aa14.75□□□□□ -0.05
VIPAS39-209ENST00000556909 SGCDQ92629 289 aa14.75□□□□□ -0.05
VIPAS39-209ENST00000556909 LRGUKQ96M69 825 aa14.75□□□□□ -0.05
VIPAS39-209ENST00000556909 WNT10AQ9GZT5 417 aa14.75□□□□□ -0.05
VIPAS39-209ENST00000556909 ZNF556Q9HAH1 456 aa14.75□□□□□ -0.05
VIPAS39-209ENST00000556909 SLC25A19Q9HC21 320 aa14.75□□□□□ -0.05
VIPAS39-209ENST00000556909 SRSF10O75494 262 aaKnown RBP14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 RBP4P02753 201 aa14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 MPZP25189 248 aa14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 GNGT1P63211 74 aa14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 SSX2Q16385 188 aa14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 LCN1P1Q5VSP4 162 aa14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 ASRGL1Q7L266 308 aa14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 OR13D1Q8NGV5 346 aa14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 ASB17Q8WXJ9 295 aa14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 MALSU1Q96EH3 234 aa14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 OR5M11Q96RB7 305 aa14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 PRSS22Q9GZN4 317 aa14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 PITPNC1Q9UKF7 332 aa14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 IKZF2Q9UKS7 526 aa14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 TMEM14AQ9Y6G1 99 aa14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 NBEAL2Q6ZNJ1 2754 aa14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 KMT2CQ8NEZ4 4911 aaKnown RBP14.74□□□□□ -0.05
VIPAS39-209ENST00000556909 MEX3AA1L020 520 aaKnown RBP14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 K7N7A8 449 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 DLGAP1O14490 977 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 GNGT2O14610 69 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 E2F6O75461 281 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 ZNF728P0DKX0 622 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 ERVK11-1P61568 191 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 ESRRGP62508 458 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 COL10A1Q03692 680 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 TMEM95Q3KNT9 176 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 Q6ZS46 218 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 ASCC1Q8N9N2 400 aaKnown RBP14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 OR11H6Q8NGC7 330 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 NSL1Q96IY1 281 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 CNN2Q99439 309 aaKnown RBP14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 TEX12Q9BXU0 123 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 MOB1AQ9H8S9 216 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 GTF2A1LQ9UNN4 478 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 SLC22A13Q9Y226 551 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 V9GYS6 101 aa14.73□□□□□ -0.05
VIPAS39-209ENST00000556909 COL7A1Q02388 2944 aa14.72□□□□□ -0.05
VIPAS39-209ENST00000556909 A6NIN4 97 aa14.72□□□□□ -0.05
VIPAS39-209ENST00000556909 LOC110117498-PIK3R3F6TDL0 507 aa14.72□□□□□ -0.05
VIPAS39-209ENST00000556909 ZNF737O75373 536 aa14.72□□□□□ -0.05
VIPAS39-209ENST00000556909 PEX14O75381 377 aa14.72□□□□□ -0.05
VIPAS39-209ENST00000556909 IGHV1-8P0DP01 117 aa14.72□□□□□ -0.05
VIPAS39-209ENST00000556909 PRKACGP22612 351 aa14.72□□□□□ -0.05
VIPAS39-209ENST00000556909 DYNLT3P51808 116 aa14.72□□□□□ -0.05
VIPAS39-209ENST00000556909 GYS2P54840 703 aa14.72□□□□□ -0.05
VIPAS39-209ENST00000556909 SNAPC1Q16533 368 aa14.72□□□□□ -0.05
VIPAS39-209ENST00000556909 BCL2L15Q5TBC7 163 aa14.72□□□□□ -0.05
VIPAS39-209ENST00000556909 TCF23Q7RTU1 214 aa14.72□□□□□ -0.05
VIPAS39-209ENST00000556909 OR14K1Q8NGZ2 314 aa14.72□□□□□ -0.05
VIPAS39-209ENST00000556909 CANT1Q8WVQ1 401 aa14.72□□□□□ -0.05
VIPAS39-209ENST00000556909 TVP23BQ9NYZ1 205 aa14.72□□□□□ -0.05
VIPAS39-209ENST00000556909 A0A1B0GTI1 187 aa14.71□□□□□ -0.05
VIPAS39-209ENST00000556909 F2RL2O00254 374 aa14.71□□□□□ -0.05
VIPAS39-209ENST00000556909 ANXA8P13928 327 aa14.71□□□□□ -0.05
VIPAS39-209ENST00000556909 JUNBP17275 347 aaPredicted RBP14.71□□□□□ -0.05
VIPAS39-209ENST00000556909 VDAC2P45880 294 aaPredicted RBP14.71□□□□□ -0.05
VIPAS39-209ENST00000556909 EDDM3BP56851 147 aa14.71□□□□□ -0.05
VIPAS39-209ENST00000556909 BLCAPP62952 87 aa14.71□□□□□ -0.05
VIPAS39-209ENST00000556909 IL24Q13007 206 aa14.71□□□□□ -0.05
VIPAS39-209ENST00000556909 ARSJQ5FYB0 599 aaPredicted RBP14.71□□□□□ -0.05
VIPAS39-209ENST00000556909 FOXB2Q5VYV0 432 aa14.71□□□□□ -0.05
VIPAS39-209ENST00000556909 PLEKHG7Q6ZR37 379 aa14.71□□□□□ -0.05
VIPAS39-209ENST00000556909 ANGPTL5Q86XS5 388 aa14.71□□□□□ -0.05
VIPAS39-209ENST00000556909 ELMOD2Q8IZ81 293 aa14.71□□□□□ -0.05
VIPAS39-209ENST00000556909 PKIBQ9C010 78 aa14.71□□□□□ -0.05
VIPAS39-209ENST00000556909 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.71□□□□□ -0.05
VIPAS39-209ENST00000556909 R4GMQ9 66 aa14.71□□□□□ -0.05
VIPAS39-209ENST00000556909 DHRS7CA6NNS2 312 aa14.7□□□□□ -0.06
VIPAS39-209ENST00000556909 MAGEB4O15481 346 aaPredicted RBP14.7□□□□□ -0.06
VIPAS39-209ENST00000556909 CALB2P22676 271 aa14.7□□□□□ -0.06
VIPAS39-209ENST00000556909 DYNC1I2Q13409 638 aaKnown RBP14.7□□□□□ -0.06
VIPAS39-209ENST00000556909 ZNF322Q6U7Q0 402 aaPredicted RBP14.7□□□□□ -0.06
VIPAS39-209ENST00000556909 Q6ZSR3 168 aa14.7□□□□□ -0.06
VIPAS39-209ENST00000556909 GDPD3Q7L5L3 318 aa14.7□□□□□ -0.06
VIPAS39-209ENST00000556909 OR8H2Q8N162 312 aa14.7□□□□□ -0.06
VIPAS39-209ENST00000556909 TRMT10AQ8TBZ6 339 aaKnown RBP14.7□□□□□ -0.06
VIPAS39-209ENST00000556909 ZNF714Q96N38 554 aa14.7□□□□□ -0.06
VIPAS39-209ENST00000556909 APOL4Q9BPW4 351 aa14.7□□□□□ -0.06
VIPAS39-209ENST00000556909 DNAJB9Q9UBS3 223 aa14.7□□□□□ -0.06
VIPAS39-209ENST00000556909 OR52A1Q9UKL2 312 aa14.7□□□□□ -0.06
VIPAS39-209ENST00000556909 HILPDAQ9Y5L2 63 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms