RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 C1orf122Q6ZSJ8 110 aa6.05□□□□□ -1.44
SCFD1-222ENST00000556768 ASRGL1Q7L266 308 aa6.05□□□□□ -1.44
SCFD1-222ENST00000556768 KRT74Q7RTS7 529 aa6.05□□□□□ -1.44
SCFD1-222ENST00000556768 KCTD20Q7Z5Y7 419 aa6.05□□□□□ -1.44
SCFD1-222ENST00000556768 TMEM86BQ8N661 226 aa6.05□□□□□ -1.44
SCFD1-222ENST00000556768 FAM216BQ8N7L0 139 aa6.05□□□□□ -1.44
SCFD1-222ENST00000556768 OR5D13Q8NGL4 314 aa6.05□□□□□ -1.44
SCFD1-222ENST00000556768 PYDC1Q8WXC3 89 aa6.05□□□□□ -1.44
SCFD1-222ENST00000556768 ZNF48Q96MX3 618 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-222ENST00000556768 TBX5Q99593 518 aa6.05□□□□□ -1.44
SCFD1-222ENST00000556768 SSBP4Q9BWG4 385 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-222ENST00000556768 WDR13Q9H1Z4 485 aa6.05□□□□□ -1.44
SCFD1-222ENST00000556768 PPP1R3EQ9H7J1 279 aa6.05□□□□□ -1.44
SCFD1-222ENST00000556768 METTL8Q9H825 291 aaKnown RBP6.05□□□□□ -1.44
SCFD1-222ENST00000556768 TNFRSF19Q9NS68 423 aa6.05□□□□□ -1.44
SCFD1-222ENST00000556768 SCOCQ9UIL1 159 aa6.05□□□□□ -1.44
SCFD1-222ENST00000556768 COPS3Q9UNS2 423 aa6.05□□□□□ -1.44
SCFD1-222ENST00000556768 PCDHGB1Q9Y5G3 927 aa6.05□□□□□ -1.44
SCFD1-222ENST00000556768 POMT1Q9Y6A1 747 aa6.05□□□□□ -1.44
SCFD1-222ENST00000556768 A0A1W2PQL4 384 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-222ENST00000556768 METTL15A6NJ78 407 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 SAC3D1A6NKF1 404 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 H0YAE9 185 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 M0R129 80 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 EBAG9O00559 213 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 SIGLEC5O15389 551 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 GATBO75879 557 aaKnown RBP6.04□□□□□ -1.44
SCFD1-222ENST00000556768 NXPH2O95156 264 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 CYB5AP00167 134 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 TTRP02766 147 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 FBP1P09467 338 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 MMP9P14780 707 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 CAV3P56539 151 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 RPL15P61313 204 aaKnown RBP6.04□□□□□ -1.44
SCFD1-222ENST00000556768 ACTC1P68032 377 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 ACTA1P68133 377 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 MEDAGQ5VYS4 303 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 NCR3LG1Q68D85 454 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 Q6YL49 198 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 ZNF788Q6ZQV5 615 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 VMO1Q7Z5L0 202 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 KIR3DL3Q8N743 410 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 LY6G5BQ8NDX9 201 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 TMEM185AQ8NFB2 350 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 OR4F5Q8NH21 305 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 ANGPTL6Q8NI99 470 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 HPSE2Q8WWQ2 592 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 AQP3Q92482 292 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 SEH1LQ96EE3 360 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 TBX15Q96SF7 602 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 DCTN5Q9BTE1 182 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 GABARAPL3Q9BY60 117 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 PRDM13Q9H4Q3 707 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 BEX1Q9HBH7 125 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 FAM181BA6NEQ2 426 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 ANKRD61A6NGH8 418 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 RFPL4AA6NLU0 287 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 RFPL4AL1F8VTS6 287 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-222ENST00000556768 M0R1W7 72 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 RHBDL1O75783 438 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 RPSAP08865 295 aaKnown RBP6.04□□□□□ -1.44
SCFD1-222ENST00000556768 UBCP0CG48 685 aaKnown RBP6.04□□□□□ -1.44
SCFD1-222ENST00000556768 PSG2P11465 335 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 POLR2IP36954 125 aaKnown RBP6.04□□□□□ -1.44
SCFD1-222ENST00000556768 ALDH3A2P51648 485 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 FUT6P51993 359 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 ODF4Q2M2E3 257 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 DMRTC1Q5HYR2 192 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 METAP1DQ6UB28 335 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-222ENST00000556768 FIP1L1Q6UN15 594 aaKnown RBP6.04□□□□□ -1.44
SCFD1-222ENST00000556768 PDZD9Q8IXQ8 264 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 ZNF561Q8N587 486 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 ZNRF1Q8ND25 227 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 DYRK2Q92630 601 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 EME1Q96AY2 570 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 C10orf35Q96D05 121 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 Q96MT0 163 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 ZNF747Q9BV97 191 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 FAM234AQ9H0X4 552 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 SIRPDQ9H106 197 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 NEK6Q9HC98 313 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 MRM2Q9UI43 246 aaKnown RBP6.04□□□□□ -1.44
SCFD1-222ENST00000556768 GNG8Q9UK08 70 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 SLC22A13Q9Y226 551 aa6.04□□□□□ -1.44
SCFD1-222ENST00000556768 FAM230AA0A1W2PPH8 454 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 DAPL1A0PJW8 107 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 MEIOCA2RUB1 952 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 A6NIN4 97 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 J3QT63 122 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 SLC16A6O15403 523 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 MAGEB4O15481 346 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-222ENST00000556768 MPZL2O60487 215 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 KNG1P01042 644 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 IGLV3-1P01715 115 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 ALPLP05186 524 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 PRDX2P32119 198 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 RPL31P62899 125 aaKnown RBP6.03□□□□□ -1.44
SCFD1-222ENST00000556768 MFGE8Q08431 387 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-222ENST00000556768 ACSM1Q08AH1 577 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms