RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 SLC7A11Q9UPY5 501 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 MAB21L2Q9Y586 359 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 AUP1Q9Y679 476 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 SLC22A20A6NK97 555 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 DBX1A6NMT0 343 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 POM121CA8CG34 1229 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 CEACAM18A8MTB9 384 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 MPTX1A8MV57 137 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 LILRA1O75019 489 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 ADAP1O75689 374 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 RP2O75695 350 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 SFT2D2O95562 160 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 DUS4LO95620 317 aaKnown RBP8.73□□□□□ -1.01
TMEM260-211ENST00000556648 RPA2P15927 270 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 NPBWR2P48146 333 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 RAB1AP62820 205 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 CLN3Q13286 438 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 IKZF1Q13422 519 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 BEX5Q5H9J7 111 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 LPCAT3Q6P1A2 487 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 CLEC18BQ6UXF7 455 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 GSG1LQ6UXU4 331 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 OVCH2Q7RTZ1 564 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 MRPL21Q7Z2W9 205 aaKnown RBP8.73□□□□□ -1.01
TMEM260-211ENST00000556648 COMMD7Q86VX2 200 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 OSR2Q8N2R0 312 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 ZNF611Q8N823 705 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 OR1K1Q8NGR3 316 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 PPP1R1CQ8WVI7 109 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 DMRTA2Q96SC8 542 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 REPIN1Q9BWE0 567 aaKnown RBP8.73□□□□□ -1.01
TMEM260-211ENST00000556648 ZDHHC11Q9H8X9 412 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 ATPIF1Q9UII2 106 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 ZNF318Q5VUA4 2279 aa8.73□□□□□ -1.01
TMEM260-211ENST00000556648 TNRC6AQ8NDV7 1962 aaKnown RBP8.72□□□□□ -1.01
TMEM260-211ENST00000556648 C13orf42A0A1B0GVH6 325 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 PQLC2LA1A4F0 135 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 F8VVB4 439 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 F8VWA3 439 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 SS18L1O75177 396 aaPredicted RBP8.72□□□□□ -1.01
TMEM260-211ENST00000556648 CA11O75493 328 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 FCGR3AP08637 254 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 PGAM2P15259 253 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 RPS2P15880 293 aaKnown RBP8.72□□□□□ -1.01
TMEM260-211ENST00000556648 HLA-GP17693 338 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 BCL3P20749 454 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 PTGER4P35408 488 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 WNT5AP41221 380 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 GPM6AP51674 278 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 SOX8P57073 446 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 TAS2R31P59538 309 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 STK11Q15831 433 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 NHLRC3Q5JS37 347 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 C11orf87Q6NUJ2 197 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 C5orf24Q7Z6I8 188 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 ZNF546Q86UE3 836 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 MYPOPQ86VE0 399 aaPredicted RBP8.72□□□□□ -1.01
TMEM260-211ENST00000556648 BHLHE23Q8NDY6 225 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 TMEM185AQ8NFB2 350 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 PXT1Q8NFP0 134 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 OR51F2Q8NH61 342 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 ASB13Q8WXK3 278 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 SLAMF9Q96A28 289 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 CXorf58Q96LI9 332 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 ZNF2Q9BSG1 426 aaPredicted RBP8.72□□□□□ -1.01
TMEM260-211ENST00000556648 WDR13Q9H1Z4 485 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 IL36GQ9NZH8 169 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 IL36RNQ9UBH0 155 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 ST3GAL6Q9Y274 331 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 PTPRBP23467 1997 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 OTOGLQ3ZCN5 2332 aa8.72□□□□□ -1.01
TMEM260-211ENST00000556648 A0A1W2PR80 420 aa8.71□□□□□ -1.01
TMEM260-211ENST00000556648 C5orf51A6NDU8 294 aa8.71□□□□□ -1.01
TMEM260-211ENST00000556648 CELA3BP08861 270 aa8.71□□□□□ -1.01
TMEM260-211ENST00000556648 CD82P27701 267 aa8.71□□□□□ -1.01
TMEM260-211ENST00000556648 MPGP29372 298 aa8.71□□□□□ -1.01
TMEM260-211ENST00000556648 RBM11P57052 281 aaKnown RBP8.71□□□□□ -1.01
TMEM260-211ENST00000556648 ARPC4P59998 168 aa8.71□□□□□ -1.01
TMEM260-211ENST00000556648 GMFBP60983 142 aa8.71□□□□□ -1.01
TMEM260-211ENST00000556648 ESCO2Q56NI9 601 aa8.71□□□□□ -1.01
TMEM260-211ENST00000556648 TMEM128Q5BJH2 165 aa8.71□□□□□ -1.01
TMEM260-211ENST00000556648 ZNF660Q6AZW8 331 aaPredicted RBP8.71□□□□□ -1.01
TMEM260-211ENST00000556648 RFPL4BQ6ZWI9 263 aa8.71□□□□□ -1.01
TMEM260-211ENST00000556648 MDP1Q86V88 176 aa8.71□□□□□ -1.01
TMEM260-211ENST00000556648 TMEM178AQ8NBL3 297 aa8.71□□□□□ -1.01
TMEM260-211ENST00000556648 BCL2L2Q92843 193 aaPredicted RBP8.71□□□□□ -1.01
TMEM260-211ENST00000556648 CPNE2Q96FN4 548 aaPredicted RBP8.71□□□□□ -1.01
TMEM260-211ENST00000556648 WBP1Q96G27 269 aa8.71□□□□□ -1.01
TMEM260-211ENST00000556648 CMSS1Q9BQ75 279 aaKnown RBP8.71□□□□□ -1.01
TMEM260-211ENST00000556648 MBD2Q9UBB5 411 aa8.71□□□□□ -1.01
TMEM260-211ENST00000556648 HSF4Q9ULV5 492 aa8.71□□□□□ -1.01
TMEM260-211ENST00000556648 TNFSF18Q9UNG2 199 aa8.71□□□□□ -1.01
TMEM260-211ENST00000556648 TTC28Q96AY4 2481 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 RNF222A6NCQ9 220 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 TEX46H3BTG2 121 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 B3GALNT1O75752 331 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 SPDEFO95238 335 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 KNG1P01042 644 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 RLN2P04090 185 aa8.71□□□□□ -1.02
TMEM260-211ENST00000556648 COX5BP10606 129 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms