RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 RAB5AP20339 215 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 OR2A2Q6IF42 318 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 BTF3L4Q96K17 158 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 ALKBH3Q96Q83 286 aaPredicted RBP13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 A6NCN8 305 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 MPTX1A8MV57 137 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 CXCL13O43927 109 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 FABP4P15090 132 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 RRADP55042 308 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 CLEC12BQ2HXU8 276 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 DMBX1Q8NFW5 382 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 EXTL1Q92935 676 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 INTS12Q96CB8 462 aaKnown RBP13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 ZNF816-ZNF321PA0A0X1KG74 233 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 LIPT2A6NK58 231 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 HEXA-AS1Q9H8Q6 139 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 LMX1BO60663 402 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 ZNF705AQ6ZN79 300 aaPredicted RBP13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 PSENENQ9NZ42 101 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 MIOXQ9UGB7 285 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 PHOX2AO14813 284 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 SULT1A1P50225 295 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 TGFBR3Q03167 851 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 C9orf50Q5SZB4 431 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 SYT13Q7L8C5 426 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 HOGA1Q86XE5 327 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 OR4F5Q8NH21 305 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 OR1F12Q8NHA8 337 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 OR4F4Q96R69 305 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 EDEM2Q9BV94 578 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 TMEM74BQ9NUR3 256 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 ZMAT5Q9UDW3 170 aaKnown RBP13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 H3BMH7 237 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 ADAM20O43506 726 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 C9orf40Q8IXQ3 194 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 PPP1R35Q8TAP8 253 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 MRPL22Q9NWU5 206 aaKnown RBP13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 A0A1W2PQF6 199 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 DXOO77932 396 aaKnown RBP13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 CALCRP30988 508 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 NCR3LG1Q68D85 454 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 ATRAIDQ6UW56 229 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 DRAM2Q6UX65 266 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 ROBO4Q8WZ75 1007 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 CRLF2Q9HC73 371 aa13.29□□□□□ -0.28
ARHGEF40-207ENST00000556399 C3orf85A0A1B0GTC6 90 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 A0A1W2PPE2 198 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 GCH1P30793 250 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 ZNF528Q3MIS6 628 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 ZNF205O95201 554 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 RPS4XP62701 263 aaKnown RBP13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 TFF2Q03403 129 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 C1orf100Q5SVJ3 147 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 ANKRD37Q7Z713 158 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 GLRX5Q86SX6 157 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 OR6X1Q8NH79 312 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 AQP3Q92482 292 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 LHX6Q9UPM6 363 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 IGLV1-36A0A0B4J1U3 117 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 C5orf49A4QMS7 147 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 RBFOX3A6NFN3 312 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 CD63P08962 238 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 UBAC2Q8NBM4 344 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 FBXO17Q96EF6 278 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 LAMP3Q9UQV4 416 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 SPAG17Q6Q759 2223 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 IGHV1OR21-1A0A087WYE8 117 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 A0A096LPE4 126 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 A0A1W2PPZ6 126 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 CD8AP01732 235 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 IFI6P09912 130 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 PRSS12P56730 875 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 OR13D1Q8NGV5 346 aa13.28□□□□□ -0.28
ARHGEF40-207ENST00000556399 NOVA1P51513 510 aaKnown RBP13.27□□□□□ -0.28
ARHGEF40-207ENST00000556399 HYAL1Q12794 435 aa13.27□□□□□ -0.28
ARHGEF40-207ENST00000556399 RAB35Q15286 201 aa13.27□□□□□ -0.28
ARHGEF40-207ENST00000556399 SLC26A1Q9H2B4 701 aa13.27□□□□□ -0.28
ARHGEF40-207ENST00000556399 A0A1W2PPQ1 181 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 PDGFBP01127 241 aaPredicted RBP13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 IL11P20809 199 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 P2RY1P47900 373 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 CEACAM16Q2WEN9 425 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 VAX1Q5SQQ9 334 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 ADAM19Q9H013 955 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 OR51I2Q9H344 312 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 PGA3P0DJD8 388 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 POLR2GP62487 172 aaKnown RBP eCLIP13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 ZNF721Q8TF20 911 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 OPA3Q9H6K4 179 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 GPR132Q9UNW8 380 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 CTSBP07858 339 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 KITLGP21583 273 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 CYB561P49447 251 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 OR2B11Q5JQS5 317 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 OR5AS1Q8N127 324 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 MTCH2Q9Y6C9 303 aa13.27□□□□□ -0.29
ARHGEF40-207ENST00000556399 CDRT15L2A8MXV6 281 aa13.26□□□□□ -0.29
ARHGEF40-207ENST00000556399 IGHEP01854 428 aa13.26□□□□□ -0.29
ARHGEF40-207ENST00000556399 CD74P04233 296 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms