RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 NELFCDQ8IXH7 590 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 ST13P4Q8IZP2 240 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-213ENST00000554776 GAPTQ8N292 157 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 MIR7-3HGQ8N6C7 128 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 SLC35G3Q8N808 338 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 SPANXA2-OT1Q8N9U9 137 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 OR5M1Q8NGP8 315 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 TNFRSF14Q92956 283 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 FXYD5Q96DB9 178 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 YIPF6Q96EC8 236 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 MRPL48Q96GC5 212 aaKnown RBP1.73□□□□□ -2.13
SCFD1-213ENST00000554776 IP6K3Q96PC2 410 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 SPACA5Q96QH8 159 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 VAT1Q99536 393 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 CTRCQ99895 268 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 PDCD1LG2Q9BQ51 273 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 SCRT1Q9BWW7 348 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 MS4A8Q9BY19 250 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 TBL1XR1Q9BZK7 514 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 PLEKHA1Q9HB21 404 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 C12orf4Q9NQ89 552 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 VAPAQ9P0L0 249 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 ANXA10Q9UJ72 324 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 SLC7A11Q9UPY5 501 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 KLF13Q9Y2Y9 288 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-213ENST00000554776 LOXHD1Q8IVV2 1947 aa1.73□□□□□ -2.13
SCFD1-213ENST00000554776 BAZ2AQ9UIF9 1905 aaKnown RBP1.73□□□□□ -2.13
SCFD1-213ENST00000554776 TICRRQ7Z2Z1 1910 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 A0A1W2PQ67 120 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 A8MWL6 223 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 E7EWF7 191 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 GATCO43716 136 aaKnown RBP1.72□□□□□ -2.13
SCFD1-213ENST00000554776 ZMPSTE24O75844 475 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 IGKV5-2P06315 115 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 GIMD1P0DJR0 217 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 HLA-GP17693 338 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 TAC1P20366 129 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 M6PRP20645 277 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 ACOT2P49753 483 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 RBX1P62877 108 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 VAMP3Q15836 100 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 ZNF678Q5SXM1 525 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 RESP18Q5W5W9 173 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 PRSS54Q6PEW0 395 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 CYP4Z2PQ8N1L4 340 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 CDRT4Q8N9R6 151 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 ST20-AS1Q8NBB2 130 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 OR8K3Q8NH51 312 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 FAM57AQ8TBR7 257 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 C19orf60Q96EN9 201 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 QKIQ96PU8 341 aaKnown RBP eCLIP1.72□□□□□ -2.139e-7■■■■■ 34.7
SCFD1-213ENST00000554776 SHCBP1LQ9BZQ2 653 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 TMBIM4Q9HC24 238 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 IFT46Q9NQC8 304 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 CYB5R1Q9UHQ9 305 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 MRM2Q9UI43 246 aaKnown RBP1.72□□□□□ -2.13
SCFD1-213ENST00000554776 PRO0628Q9UI54 55 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 ENPP5Q9UJA9 477 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 ACOT9Q9Y305 439 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 ZNF706Q9Y5V0 76 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-213ENST00000554776 SCN4AP35499 1836 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 GPR179Q6PRD1 2367 aa1.72□□□□□ -2.13
SCFD1-213ENST00000554776 SIGLEC1Q9BZZ2 1709 aa1.71□□□□□ -2.13
SCFD1-213ENST00000554776 GOLGA8QA0A0J9YX86 632 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 LINC00854A0A1B0GVQ3 168 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 ZNF98A6NK75 572 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 C16orf90A8MZG2 172 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 ZNF879B4DU55 563 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 PRAMEF26H0Y7S4 382 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 CLDN34H7C241 214 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 ZNF593O00488 134 aaPredicted RBP1.71□□□□□ -2.14
SCFD1-213ENST00000554776 MFNGO00587 321 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 LHBP01229 141 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 CD8AP01732 235 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 APOA1P02647 267 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 IL12BP29460 328 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 MAGEA3P43357 314 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 GDI2P50395 445 aaKnown RBP1.71□□□□□ -2.14
SCFD1-213ENST00000554776 BTN1A1Q13410 526 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 MAPRE2Q15555 327 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 DNLZQ5SXM8 178 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 MORN3Q6PF18 240 aaPredicted RBP1.71□□□□□ -2.14
SCFD1-213ENST00000554776 TBPL2Q6SJ96 375 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 IGFL1Q6UW32 110 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 FAM131AQ6UXB0 335 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 DAZ4Q86SG3 579 aaKnown RBP1.71□□□□□ -2.14
SCFD1-213ENST00000554776 LRRC8AQ8IWT6 810 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 SPERTQ8NA61 448 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 OR8G5Q8NG78 346 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 OR2K2Q8NGT1 345 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 OR2AE1Q8NHA4 323 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 DOK4Q8TEW6 326 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 ORAOV1Q8WV07 137 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 BLNKQ8WV28 456 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 DEDD2Q8WXF8 326 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 OR5P2Q8WZ92 322 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 RBPMSQ93062 196 aaKnown RBP1.71□□□□□ -2.14
SCFD1-213ENST00000554776 FMC1Q96HJ9 113 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 CATSPER2Q96P56 530 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 OR2M4Q96R27 311 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms