RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 NGFP01138 241 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 COX5BP10606 129 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 SLC6A1P30531 599 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 IL2RGP31785 369 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 MPV17P39210 176 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 CAPZA1P52907 286 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 DGCR2P98153 550 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 DYRK1AQ13627 763 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 C1orf100Q5SVJ3 147 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 MBNL2Q5VZF2 373 aaKnown RBP10.55□□□□□ -0.72
SHMT2-214ENST00000554604 TOMM5Q8N4H5 51 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 LINC01356Q8N9X3 169 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 GJC3Q8NFK1 279 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 OR6M1Q8NGM8 313 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 FOXRED1Q96CU9 486 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-214ENST00000554604 MARVELD1Q9BSK0 173 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 SOX7Q9BT81 388 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 SAP30LQ9HAJ7 183 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 NKIRAS2Q9NYR9 191 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 TAS2R4Q9NYW5 299 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 TANC2Q9HCD6 1990 aa10.55□□□□□ -0.72
SHMT2-214ENST00000554604 FBN1P35555 2871 aaKnown RBP10.54□□□□□ -0.72
SHMT2-214ENST00000554604 IGHV1-69-2A0A0G2JMI3 117 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 A0A1B0GTI1 187 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 A0A1B0GVI7 797 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 H3BSH0 61 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 SYT7O43581 403 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 SPRY3O43610 288 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 TIMM8AO60220 97 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-214ENST00000554604 ICMTO60725 284 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 ECDO95905 644 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-214ENST00000554604 CD3GP09693 182 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 SRD5A1P18405 259 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 CCL1P22362 96 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 HLA-DMAP28067 261 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 DDOSTP39656 456 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 TPTEP56180 551 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 BTG1P62324 171 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 PLA1AQ53H76 456 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 TMEM69Q5SWH9 247 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 FAM120AOSQ5T036 256 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 RSBN1Q5VWQ0 802 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-214ENST00000554604 LYPD6Q86Y78 171 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 SERPINA12Q8IW75 414 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 GTF3AQ92664 365 aaKnown RBP10.54□□□□□ -0.72
SHMT2-214ENST00000554604 SLC25A28Q96A46 364 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 CREB3L1Q96BA8 519 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 FAM3DQ96BQ1 224 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 MDFIQ99750 246 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 EGLN1Q9GZT9 426 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 COPZ2Q9P299 210 aa10.54□□□□□ -0.72
SHMT2-214ENST00000554604 CGGBP1Q9UFW8 167 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-214ENST00000554604 MRPS7Q9Y2R9 242 aaKnown RBP10.54□□□□□ -0.72
SHMT2-214ENST00000554604 RBMX2Q9Y388 322 aaKnown RBP10.54□□□□□ -0.72
SHMT2-214ENST00000554604 STAB1Q9NY15 2570 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 RER1O15258 196 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 XRCC3O43542 346 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 ORC5O43913 435 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 RP2O75695 350 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 APOC1P02654 83 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 TUBG1P23258 451 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 CDK2P24941 298 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 HTR2CP28335 458 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 CX3CR1P49238 355 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 POU3F4P49335 361 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 ZNF121P58317 390 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-214ENST00000554604 TAS2R20P59543 309 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 CD300CQ08708 224 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 KLF9Q13886 244 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-214ENST00000554604 CR1LQ2VPA4 569 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 HFEQ30201 348 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 C2orf76Q3KRA6 126 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 FAM209AQ5JX71 171 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 ZNF529Q6P280 563 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 IL17RELQ6ZVW7 336 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 PRSS45Q7RTY3 260 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 IZUMO1Q8IYV9 350 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 CCDC54Q8NEL0 328 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 OR51D1Q8NGF3 324 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 OR8B12Q8NGG6 310 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 OR1F12Q8NHA8 337 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 CLDND2Q8NHS1 167 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 FCAMRQ8WWV6 532 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 SLC7A6Q92536 515 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 PTX4Q96A99 478 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 ELMOD3Q96FG2 381 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 DPAGT1Q9H3H5 408 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 TUBG2Q9NRH3 451 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 NLKQ9UBE8 527 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 ZDHHC8Q9ULC8 765 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 DOCK11Q5JSL3 2073 aa10.53□□□□□ -0.72
SHMT2-214ENST00000554604 SVEP1Q4LDE5 3571 aa10.52□□□□□ -0.72
SHMT2-214ENST00000554604 A0A0A6YYH2 397 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 TMEM272A0A1B0GTI8 110 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 OR6C6A6NF89 314 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 NAP1L6A6NFF2 107 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 A6NJ64 397 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 B4DSR2 109 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 CCNKO75909 580 aa10.52□□□□□ -0.73
SHMT2-214ENST00000554604 IGLV3-1P01715 115 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms