RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 PGLYRP3Q96LB9 341 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 FAM210AQ96ND0 272 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 ZNF382Q96SR6 550 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 UCK1Q9HA47 277 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 RHOFQ9HBH0 211 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 ADAMTS13Q76LX8 1427 aa3.92□□□□□ -1.78
SCFD1-208ENST00000553278 TRBV6-6A0A0A6YYG2 114 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 IGKV3D-20A0A0C4DH25 116 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 C11orf94C9JXX5 98 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 FGF16O43320 207 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 ATP8B1O43520 1251 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 ENTPD6O75354 484 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 GCM2O75603 506 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-208ENST00000553278 GATBO75879 557 aaKnown RBP3.91□□□□□ -1.78
SCFD1-208ENST00000553278 GAS8-AS1O95177 125 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 ATP6V1G2O95670 118 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 HLA-AP01891 365 aaKnown RBP3.91□□□□□ -1.78
SCFD1-208ENST00000553278 ZNF688P0C7X2 276 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 PSKH1P11801 424 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 HIST1H1CP16403 213 aaKnown RBP3.91□□□□□ -1.78
SCFD1-208ENST00000553278 F8A1P23610 371 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 MNAT1P51948 309 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 MRPS15P82914 257 aaKnown RBP3.91□□□□□ -1.78
SCFD1-208ENST00000553278 SLC36A2Q495M3 483 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 ACTBL2Q562R1 376 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 GUSBP11Q6P575 273 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 DRAM2Q6UX65 266 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 SLC16A13Q7RTY0 426 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 PGAM4Q8N0Y7 254 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 RNF175Q8N4F7 328 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 OR4M1Q8NGD0 313 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 CPNE4Q96A23 557 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-208ENST00000553278 PDXPQ96GD0 296 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 MRPL20Q9BYC9 149 aaKnown RBP3.91□□□□□ -1.78
SCFD1-208ENST00000553278 FGF23Q9GZV9 251 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-208ENST00000553278 NSRP1Q9H0G5 558 aaKnown RBP3.91□□□□□ -1.78
SCFD1-208ENST00000553278 C12orf10Q9HB07 376 aa3.91□□□□□ -1.78
SCFD1-208ENST00000553278 SPANXB1Q9NS25 103 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-208ENST00000553278 NUP153P49790 1475 aaKnown RBP3.91□□□□□ -1.78
SCFD1-208ENST00000553278 LTBP1Q14766 1721 aa3.9□□□□□ -1.78
SCFD1-208ENST00000553278 OR5H1A6NKK0 313 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 HPGDSO60760 199 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 DHRS3O75911 302 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 IGHV3-11P01762 117 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 MRPL3P09001 348 aaKnown RBP3.9□□□□□ -1.79
SCFD1-208ENST00000553278 TSPOP30536 169 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 PPP1CAP62136 330 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 GRB2P62993 217 aaKnown RBP3.9□□□□□ -1.79
SCFD1-208ENST00000553278 HBG1P69891 147 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 HBG2P69892 147 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 ZNF239Q16600 458 aaKnown RBP3.9□□□□□ -1.79
SCFD1-208ENST00000553278 SLC25A35Q3KQZ1 300 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 CLEC12AQ5QGZ9 265 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 CYB5R2Q6BCY4 276 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 FAM183BPQ6ZVS7 135 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 PAGE2Q7Z2X7 111 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 DCXRQ7Z4W1 244 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 SLC13A5Q86YT5 568 aaPredicted RBP3.9□□□□□ -1.79
SCFD1-208ENST00000553278 ZNF645Q8N7E2 425 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 C15orf56Q8N910 161 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 OR5W2Q8NH69 310 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 OR1L1Q8NH94 360 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 GPR22Q99680 433 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 FAAP24Q9BTP7 215 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 TAPBPLQ9BX59 468 aa3.9□□□□□ -1.79
SCFD1-208ENST00000553278 IGKV6D-21A0A0A0MT36 114 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 CCL15-CCL14A0A0B4J2E2 113 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 I3L4J1 428 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 BPY2O14599 106 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 PHYHO14832 338 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 SOCS1O15524 211 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 CYTH3O43739 400 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 ZNF861PO60384 105 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 APCSP02743 223 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 IGKV5-2P06315 115 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 OR4Q2P0C623 313 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 ELK1P19419 428 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 COILP38432 576 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-208ENST00000553278 LGALS7P47929 136 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 ACOT2P49753 483 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 CCL23P55773 120 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 ESRRGP62508 458 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 CTAG1AP78358 180 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 PRDX1Q06830 199 aaKnown RBP3.89□□□□□ -1.79
SCFD1-208ENST00000553278 CCL15Q16663 113 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 UBE2SQ16763 222 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 RGS21Q2M5E4 152 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 SPINK14Q6IE38 97 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 C12orf56Q8IXR9 622 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 ARIH2OSQ8N7S6 290 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 SLC26A10Q8NG04 563 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 OR8J2Q8NGG1 315 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 SYNPRQ8TBG9 265 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 S100PBPQ96BU1 408 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 YIPF6Q96EC8 236 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 SPACA5Q96QH8 159 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 SUCNR1Q9BXA5 334 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 SLC17A9Q9BYT1 436 aa3.89□□□□□ -1.79
SCFD1-208ENST00000553278 MFSD1Q9H3U5 465 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms