RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 FN3KQ9H479 309 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 RPRD1BQ9NQG5 326 aaKnown RBP4.24□□□□□ -1.73
HOXB3-213ENST00000552000 CENPMQ9NSP4 180 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 ERVK13-1Q9NX77 482 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 VNN3Q9NY84 501 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 SIGLEC7Q9Y286 467 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 ZNF256Q9Y2P7 627 aaPredicted RBP4.24□□□□□ -1.73
HOXB3-213ENST00000552000 LRP12Q9Y561 859 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 PKHD1P08F94 4074 aa4.24□□□□□ -1.73
HOXB3-213ENST00000552000 VPS13DQ5THJ4 4388 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 hCG_38984A0A1B0GV85 526 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 TMEM120BA0PK00 339 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 UNC119BA6NIH7 251 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 RFPL4AA6NLU0 287 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 TMEM210A6NLX4 147 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 ZNF850A8MQ14 1090 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 C17orf98A8MV24 154 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 RFPL4AL1F8VTS6 287 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 CCL24O00175 119 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 ANGPT2O15123 496 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 SLC22A2O15244 555 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 RENP00797 406 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 AMY1AP04745 511 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 ANXA2P07355 339 aaKnown RBP4.23□□□□□ -1.73
HOXB3-213ENST00000552000 CLEC2LP0C7M8 214 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 PGA5P0DJD9 388 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 PSKH1P11801 424 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 ZNF823P16415 610 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 DCTDP32321 178 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 PYCR1P32322 319 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 OR3A4PP47883 348 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 DLX6P56179 175 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 VSNL1P62760 191 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 PRDX4Q13162 271 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 DEFB136Q30KP8 78 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 KLHL12Q53G59 568 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 MINOS1Q5TGZ0 78 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 C16orf82Q7Z2V1 217 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 DCXRQ7Z4W1 244 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 VTCN1Q7Z7D3 282 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 ZDHHC21Q8IVQ6 265 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 ZNF695Q8IW36 515 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 CD177Q8N6Q3 437 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 CSNK2A3Q8NEV1 391 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 OR11H6Q8NGC7 330 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 OR4C15Q8NGM1 316 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 OR5M8Q8NGP6 311 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 SGK3Q96BR1 496 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 AKR1E2Q96JD6 320 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 RNF170Q96K19 258 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 NOL4LQ96MY1 436 aaPredicted RBP4.23□□□□□ -1.73
HOXB3-213ENST00000552000 KCNJ15Q99712 375 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 CDIP1Q9H305 208 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 SCOCQ9UIL1 159 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 KCNG2Q9UJ96 466 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 TMEM5Q9Y2B1 443 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 MINOS1-NBL1R4GNA1 71 aa4.23□□□□□ -1.73
HOXB3-213ENST00000552000 OR6C68A6NDL8 312 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 SLC1A7O00341 560 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 MTRF1O75570 445 aaKnown RBP4.22□□□□□ -1.73
HOXB3-213ENST00000552000 OR2F2O95006 317 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 SPARCP09486 303 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 FRMD6-AS1P0C7T7 363 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 ZNF728P0DKX0 622 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 IGHV1-8P0DP01 117 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 HIST1H1CP16403 213 aaKnown RBP4.22□□□□□ -1.73
HOXB3-213ENST00000552000 SLC6A1P30531 599 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 KDELR2P33947 212 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 CX3CR1P49238 355 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 GPM6AP51674 278 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 ACTA2P62736 377 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 ACTG2P63267 376 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 SELENOWP63302 87 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 ACTC1P68032 377 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 ACTA1P68133 377 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 LSAMPQ13449 338 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 EIF2B1Q14232 305 aaKnown RBP4.22□□□□□ -1.73
HOXB3-213ENST00000552000 SEC23BQ15437 767 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 ZNF260Q3ZCT1 412 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 FAM76BQ5HYJ3 339 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 LCN8Q6JVE9 175 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 NANOGP8Q6NSW7 305 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 PLBD1Q6P4A8 553 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 SMARCD3Q6STE5 483 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 ACP7Q6ZNF0 438 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 FAM57BQ71RH2 274 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 FANK1Q8TC84 345 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 HPSE2Q8WWQ2 592 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 OR5P3Q8WZ94 311 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 PIGCQ92535 297 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 STMN2Q93045 179 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 SLAMF6Q96DU3 332 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 C16orf92Q96LL3 132 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 ZNF488Q96MN9 340 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 RBM14Q96PK6 669 aaKnown RBP4.22□□□□□ -1.73
HOXB3-213ENST00000552000 CDRT15Q96T59 188 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 CCDC28BQ9BUN5 200 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 IFT27Q9BW83 186 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 EDA2RQ9HAV5 297 aa4.22□□□□□ -1.73
HOXB3-213ENST00000552000 ZFP57Q9NU63 452 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms