RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 DNAJC8O75937 253 aaPredicted RBP11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 NRASP01111 189 aa11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 EDDM3BP56851 147 aa11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 IL18R1Q13478 541 aa11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 LDLRAD2Q5SZI1 272 aa11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 DEGS2Q6QHC5 323 aa11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 CYP2R1Q6VVX0 501 aa11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 GDPD3Q7L5L3 318 aa11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 PIGWQ7Z7B1 504 aa11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 NDNFQ8TB73 568 aa11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 OR51E1Q8TCB6 317 aa11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 B9D2Q9BPU9 175 aa11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 MROQ9BYG7 248 aa11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 PBOV1Q9GZY1 135 aa11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 GPR84Q9NQS5 396 aa11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 FAM206AQ9NX38 181 aa11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 KLHDC2Q9Y2U9 406 aa11.38□□□□□ -0.59
CHMP1A-210ENST00000551981 DHRS3O75911 302 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 ALOX5APP20292 161 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 RPS7P62081 194 aaKnown RBP11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 ACTA2P62736 377 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 ACTG2P63267 376 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 ACTC1P68032 377 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 ACTA1P68133 377 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 EGFEM1PQ0D2K5 195 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 ZNF829Q3KNS6 432 aaPredicted RBP11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 KHDC1LQ5JSQ8 128 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 SLC35D3Q5M8T2 416 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 CLVS2Q5SYC1 327 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 OR2T5Q6IEZ7 315 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 C16orf89Q6UX73 402 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 ZBTB49Q6ZSB9 765 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 OR10G2Q8NGC3 310 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 OR2T29Q8NH02 315 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 MYDGFQ969H8 173 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 ZNF714Q96N38 554 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 NIPSNAP1Q9BPW8 284 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 MAGIXQ9H6Y5 334 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 HES4Q9HCC6 221 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 NDE1Q9NXR1 346 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 TAS2R1Q9NYW7 299 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 SLC22A13Q9Y226 551 aa11.37□□□□□ -0.59
CHMP1A-210ENST00000551981 hADV38S2A0JD32 116 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 FAM90A22PA8MWA6 464 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 CHRM2P08172 466 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 ESRRGP62508 458 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 COL10A1Q03692 680 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 MEF2CQ06413 473 aaPredicted RBP11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 GK3PQ14409 553 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 TCTEX1D4Q5JR98 221 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 ASRGL1Q7L266 308 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 BATF2Q8N1L9 274 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 ZNF676Q8N7Q3 588 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 TEAD3Q99594 435 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 ELAC2Q9BQ52 826 aaKnown RBP11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 YIPF3Q9GZM5 350 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 LIN7BQ9HAP6 207 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 INPP5EQ9NRR6 644 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 VNN3Q9NY84 501 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 ACTR3BQ9P1U1 418 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 NUFIP1Q9UHK0 495 aaKnown RBP11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 SESN1Q9Y6P5 492 aa11.36□□□□□ -0.59
CHMP1A-210ENST00000551981 IGHV2-26A0A0B4J1V2 119 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 PQLC2LA1A4F0 135 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 MEX3AA1L020 520 aaKnown RBP11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 PSMD9O00233 223 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 DLGAP1O14490 977 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 ZNF254O75437 659 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 IGLV3-1P01715 115 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 HMGN1P05114 100 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 JUNBP17275 347 aaPredicted RBP11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 ATP6V1B2P21281 511 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 MPZP25189 248 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 HOXD3P31249 432 aaPredicted RBP11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 BRS3P32247 399 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 ARHGDIBP52566 201 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 GINS1Q14691 196 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 CPOQ8IVL8 374 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 DEFB107AQ8IZN7 70 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 OR8H2Q8N162 312 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 FEVQ99581 238 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 CLEC7AQ9BXN2 247 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 GPR173Q9NS66 373 aa11.35□□□□□ -0.59
CHMP1A-210ENST00000551981 ZNF737O75373 536 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 HTR1DP28221 377 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 RIDAP52758 137 aaKnown RBP11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 HCCSP53701 268 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 ERVK11-1P61568 191 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 CBX1P83916 185 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 IL24Q13007 206 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 FAM98BQ52LJ0 330 aaKnown RBP11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 HSP90B2PQ58FF3 399 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 TMEM42Q69YG0 159 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 ZNF679Q8IYX0 411 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 LINC00482Q8N8I6 264 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 OR51D1Q8NGF3 324 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 GIPC3Q8TF64 312 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 ASB17Q8WXJ9 295 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 STMN2Q93045 179 aa11.34□□□□□ -0.59
CHMP1A-210ENST00000551981 TEX12Q9BXU0 123 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms