RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 DYRK2Q92630 601 aa16.85■□□□□ 0.29
SSH1-209ENST00000551165 FAAP24Q9BTP7 215 aa16.85■□□□□ 0.29
SSH1-209ENST00000551165 IFT46Q9NQC8 304 aa16.85■□□□□ 0.29
SSH1-209ENST00000551165 MTCH1Q9NZJ7 389 aa16.85■□□□□ 0.29
SSH1-209ENST00000551165 IL36RNQ9UBH0 155 aa16.85■□□□□ 0.29
SSH1-209ENST00000551165 SPTA1P02549 2419 aa16.85■□□□□ 0.29
SSH1-209ENST00000551165 HRH1P35367 487 aa16.85■□□□□ 0.29
SSH1-209ENST00000551165 EIF2S3LQ2VIR3 472 aaKnown RBP16.85■□□□□ 0.29
SSH1-209ENST00000551165 OR5A2Q8NGI9 324 aa16.85■□□□□ 0.29
SSH1-209ENST00000551165 MARS2Q96GW9 593 aaKnown RBP16.85■□□□□ 0.29
SSH1-209ENST00000551165 ZNF488Q96MN9 340 aa16.85■□□□□ 0.29
SSH1-209ENST00000551165 SEC22CQ9BRL7 303 aa16.85■□□□□ 0.29
SSH1-209ENST00000551165 ST3GAL6Q9Y274 331 aa16.85■□□□□ 0.29
SSH1-209ENST00000551165 HEATR1Q9H583 2144 aaKnown RBP16.84■□□□□ 0.29
SSH1-209ENST00000551165 IGHV2OR16-5A0A0B4J2B6 119 aa16.84■□□□□ 0.29
SSH1-209ENST00000551165 PMP2P02689 132 aa16.84■□□□□ 0.29
SSH1-209ENST00000551165 HOXD4P09016 255 aaPredicted RBP16.84■□□□□ 0.29
SSH1-209ENST00000551165 FCN2Q15485 313 aa16.84■□□□□ 0.29
SSH1-209ENST00000551165 HAGHLQ6PII5 290 aaPredicted RBP16.84■□□□□ 0.29
SSH1-209ENST00000551165 BPIFB2Q8N4F0 458 aa16.84■□□□□ 0.29
SSH1-209ENST00000551165 CHST6Q9GZX3 395 aa16.84■□□□□ 0.29
SSH1-209ENST00000551165 MOV10Q9HCE1 1003 aaKnown RBP16.84■□□□□ 0.29
SSH1-209ENST00000551165 PLEKHJ1Q9NW61 149 aa16.84■□□□□ 0.29
SSH1-209ENST00000551165 IL36GQ9NZH8 169 aa16.84■□□□□ 0.29
SSH1-209ENST00000551165 FAM189A2Q15884 450 aa16.84■□□□□ 0.29
SSH1-209ENST00000551165 IDO2Q6ZQW0 420 aa16.84■□□□□ 0.29
SSH1-209ENST00000551165 WDR86Q86TI4 376 aa16.84■□□□□ 0.29
SSH1-209ENST00000551165 DRAXINQ8NBI3 349 aaPredicted RBP16.84■□□□□ 0.29
SSH1-209ENST00000551165 DEDD2Q8WXF8 326 aa16.84■□□□□ 0.29
SSH1-209ENST00000551165 DACT3Q96B18 629 aaPredicted RBP16.84■□□□□ 0.29
SSH1-209ENST00000551165 HIST1H2AAQ96QV6 131 aa16.84■□□□□ 0.29
SSH1-209ENST00000551165 ST6GALNAC5Q9BVH7 336 aa16.84■□□□□ 0.29
SSH1-209ENST00000551165 OR51J1Q9H342 316 aa16.84■□□□□ 0.29
SSH1-209ENST00000551165 NPDC1Q9NQX5 325 aaPredicted RBP16.84■□□□□ 0.29
SSH1-209ENST00000551165 MPC1Q9Y5U8 109 aa16.84■□□□□ 0.29
SSH1-209ENST00000551165 CADP27708 2225 aa16.83■□□□□ 0.29
SSH1-209ENST00000551165 H0YL77 283 aa16.83■□□□□ 0.28
SSH1-209ENST00000551165 TRAPPC2P0DI81 140 aa16.83■□□□□ 0.28
SSH1-209ENST00000551165 TRAPPC2BP0DI82 140 aa16.83■□□□□ 0.28
SSH1-209ENST00000551165 VSIG10L2P0DP72 767 aa16.83■□□□□ 0.28
SSH1-209ENST00000551165 RAG2P55895 527 aa16.83■□□□□ 0.28
SSH1-209ENST00000551165 RBMS2Q15434 407 aaKnown RBP16.83■□□□□ 0.28
SSH1-209ENST00000551165 PNLIPRP3Q17RR3 467 aa16.83■□□□□ 0.28
SSH1-209ENST00000551165 SCGB2B2Q4G0G5 96 aa16.83■□□□□ 0.28
SSH1-209ENST00000551165 OR10AD1Q8NGE0 317 aa16.83■□□□□ 0.28
SSH1-209ENST00000551165 MRGPRFQ96AM1 343 aa16.83■□□□□ 0.28
SSH1-209ENST00000551165 SULT4A1Q9BR01 284 aa16.83■□□□□ 0.28
SSH1-209ENST00000551165 ACTR6Q9GZN1 396 aa16.83■□□□□ 0.28
SSH1-209ENST00000551165 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.83■□□□□ 0.28
SSH1-209ENST00000551165 ZNF221Q9UK13 617 aa16.83■□□□□ 0.28
SSH1-209ENST00000551165 J3QW42 95 aa16.82■□□□□ 0.28
SSH1-209ENST00000551165 ZNF780AO75290 641 aaPredicted RBP16.82■□□□□ 0.28
SSH1-209ENST00000551165 SELEP16581 610 aa16.82■□□□□ 0.28
SSH1-209ENST00000551165 OR11H7Q8NGC8 314 aa16.82■□□□□ 0.28
SSH1-209ENST00000551165 ANAPC10Q9UM13 185 aa16.82■□□□□ 0.28
SSH1-209ENST00000551165 ADGRG4Q8IZF6 3080 aa16.82■□□□□ 0.28
SSH1-209ENST00000551165 ITPR1Q14643 2758 aa16.82■□□□□ 0.28
SSH1-209ENST00000551165 IGKV1D-8A0A087WSZ0 117 aa16.82■□□□□ 0.28
SSH1-209ENST00000551165 RHBDL1O75783 438 aa16.82■□□□□ 0.28
SSH1-209ENST00000551165 RAC2P15153 192 aa16.82■□□□□ 0.28
SSH1-209ENST00000551165 MICBQ29980 383 aa16.82■□□□□ 0.28
SSH1-209ENST00000551165 RNASE10Q5GAN6 216 aaKnown RBP16.82■□□□□ 0.28
SSH1-209ENST00000551165 ZSCAN4Q8NAM6 433 aaPredicted RBP16.82■□□□□ 0.28
SSH1-209ENST00000551165 OR52B4Q8NGK2 314 aa16.82■□□□□ 0.28
SSH1-209ENST00000551165 OR13C8Q8NGS7 320 aa16.82■□□□□ 0.28
SSH1-209ENST00000551165 OCSTAMPQ9BR26 566 aa16.82■□□□□ 0.28
SSH1-209ENST00000551165 OBP2BQ9NPH6 170 aa16.82■□□□□ 0.28
SSH1-209ENST00000551165 ZNF107Q9UII5 783 aaPredicted RBP16.82■□□□□ 0.28
SSH1-209ENST00000551165 AMDHD2Q9Y303 409 aa16.82■□□□□ 0.28
SSH1-209ENST00000551165 M0R1B8 84 aa16.81■□□□□ 0.28
SSH1-209ENST00000551165 RLN1P04808 185 aa16.81■□□□□ 0.28
SSH1-209ENST00000551165 CXCL3P19876 107 aa16.81■□□□□ 0.28
SSH1-209ENST00000551165 CHATP28329 748 aa16.81■□□□□ 0.28
SSH1-209ENST00000551165 CCKARP32238 428 aa16.81■□□□□ 0.28
SSH1-209ENST00000551165 FABP6P51161 128 aa16.81■□□□□ 0.28
SSH1-209ENST00000551165 RBM11P57052 281 aaKnown RBP16.81■□□□□ 0.28
SSH1-209ENST00000551165 MSMPQ1L6U9 139 aa16.81■□□□□ 0.28
SSH1-209ENST00000551165 TIMM23BQ5SRD1 257 aa16.81■□□□□ 0.28
SSH1-209ENST00000551165 RELL2Q8NC24 303 aaPredicted RBP16.81■□□□□ 0.28
SSH1-209ENST00000551165 OR4K15Q8NH41 348 aa16.81■□□□□ 0.28
SSH1-209ENST00000551165 AK3Q9UIJ7 227 aa16.81■□□□□ 0.28
SSH1-209ENST00000551165 CACNA1AO00555 2505 aa16.81■□□□□ 0.28
SSH1-209ENST00000551165 OPRM1P35372 400 aa16.81■□□□□ 0.28
SSH1-209ENST00000551165 RBMXP38159 391 aaKnown RBP16.81■□□□□ 0.28
SSH1-209ENST00000551165 CAPSLQ8WWF8 208 aa16.81■□□□□ 0.28
SSH1-209ENST00000551165 EMG1Q92979 244 aaKnown RBP16.81■□□□□ 0.28
SSH1-209ENST00000551165 MED28Q9H204 178 aa16.81■□□□□ 0.28
SSH1-209ENST00000551165 FAM221AA4D161 298 aa16.8■□□□□ 0.28
SSH1-209ENST00000551165 SMLR1H3BR10 107 aa16.8■□□□□ 0.28
SSH1-209ENST00000551165 DUSP1P28562 367 aa16.8■□□□□ 0.28
SSH1-209ENST00000551165 GNG3P63215 75 aa16.8■□□□□ 0.28
SSH1-209ENST00000551165 NAAAQ02083 359 aa16.8■□□□□ 0.28
SSH1-209ENST00000551165 UNQ6494/PRO21346Q6UXR6 183 aa16.8■□□□□ 0.28
SSH1-209ENST00000551165 PIAS4Q8N2W9 510 aaPredicted RBP16.8■□□□□ 0.28
SSH1-209ENST00000551165 OR51I2Q9H344 312 aa16.8■□□□□ 0.28
SSH1-209ENST00000551165 TUBD1Q9UJT1 453 aa16.8■□□□□ 0.28
SSH1-209ENST00000551165 SERPINE3A8MV23 424 aa16.8■□□□□ 0.28
SSH1-209ENST00000551165 IQCF6A8MYZ5 107 aa16.8■□□□□ 0.28
SSH1-209ENST00000551165 NAT1P18440 290 aa16.8■□□□□ 0.28
SSH1-209ENST00000551165 C17orf107Q6ZR85 190 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms