RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 IER3P46695 156 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 GPM6AP51674 278 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 OR12D2P58182 307 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 ADARB1P78563 741 aaKnown RBP11.44□□□□□ -0.58
PTCH1-217ENST00000548420 GABPB1Q06547 395 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-217ENST00000548420 RAB40BQ12829 278 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 GALEQ14376 348 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 TP53I3Q53FA7 332 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 WDR38Q5JTN6 314 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 CEP78Q5JTW2 689 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 CLVS2Q5SYC1 327 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 OGFRL1Q5TC84 451 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-217ENST00000548420 ZNF691Q5VV52 312 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 MOB3CQ70IA8 216 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 THAP5Q7Z6K1 395 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 COMMD2Q86X83 199 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 BOLLQ8N9W6 283 aaKnown RBP11.44□□□□□ -0.58
PTCH1-217ENST00000548420 OR2G2Q8NGZ5 317 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 TBC1D15Q8TC07 691 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 RPL3LQ92901 407 aaKnown RBP11.44□□□□□ -0.58
PTCH1-217ENST00000548420 C12orf43Q96C57 262 aaKnown RBP11.44□□□□□ -0.58
PTCH1-217ENST00000548420 ACOXLQ9NUZ1 547 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 CLN8Q9UBY8 286 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 OR5V1Q9UGF6 321 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 GNG8Q9UK08 70 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 GTF2A1LQ9UNN4 478 aa11.44□□□□□ -0.58
PTCH1-217ENST00000548420 KIAA1109Q2LD37 5005 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 GYPAP02724 150 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 ISG15P05161 165 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 NHLRC4P0CG21 123 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-217ENST00000548420 AMY2BP19961 511 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 PEX2P28328 305 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 TGM4P49221 684 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 CCR9P51686 369 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 LRRC36Q1X8D7 754 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 MICBQ29980 383 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 ZNF555Q8NEP9 628 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 WFDC9Q8NEX5 89 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 AQP3Q92482 292 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 SEH1LQ96EE3 360 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 PELI1Q96FA3 418 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 SMURF1Q9HCE7 757 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 AMBNQ9NP70 447 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 INPP5EQ9NRR6 644 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 FRRS1LQ9P0K9 344 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 ERVK-18Q9QC07 812 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 MYRFQ9Y2G1 1151 aa11.43□□□□□ -0.58
PTCH1-217ENST00000548420 RPL36Q9Y3U8 105 aaKnown RBP11.43□□□□□ -0.58
PTCH1-217ENST00000548420 IGHV3OR15-7A0A075B7D8 119 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 PQLC2LA1A4F0 135 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 C22orf46C9J442 243 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 ADAM20O43506 726 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 SYT7O43581 403 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 NOS1APO75052 506 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-217ENST00000548420 RHBDL1O75783 438 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 FADS2O95864 444 aaKnown RBP11.42□□□□□ -0.58
PTCH1-217ENST00000548420 ACAA1P09110 424 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-217ENST00000548420 NANOS3P60323 173 aaKnown RBP11.42□□□□□ -0.58
PTCH1-217ENST00000548420 NSUN5P1Q3KNT7 163 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 TTC23Q5W5X9 447 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 STUMQ69YW2 141 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 SLC35E4Q6ICL7 350 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 KCTD8Q6ZWB6 473 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 FAM220AQ7Z4H9 259 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 LHFPL3Q86UP9 236 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 SYS1Q8N2H4 156 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 OR52I1Q8NGK6 324 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 ZNF671Q8TAW3 534 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 C10orf35Q96D05 121 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 JAM3Q9BX67 310 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 DNTTIP1Q9H147 329 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 WDR13Q9H1Z4 485 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 DCLRE1BQ9H816 532 aa11.42□□□□□ -0.58
PTCH1-217ENST00000548420 FGF20Q9NP95 211 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-217ENST00000548420 A0A1B0GVI7 797 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 A6NIN4 97 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 OR4C45A6NMZ5 311 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 ADARB2-AS1A8MUL3 147 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 J3QLW9 94 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 AKR7A2O43488 359 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 CLIC3O95833 236 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 UBCP0CG48 685 aaKnown RBP11.41□□□□□ -0.58
PTCH1-217ENST00000548420 ZNF19P17023 458 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 MPZP25189 248 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 ACTA2P62736 377 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 ACTG2P63267 376 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 ELF3P78545 371 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-217ENST00000548420 UBE2V2Q15819 145 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 SMN1Q16637 294 aaKnown RBP11.41□□□□□ -0.58
PTCH1-217ENST00000548420 ODF4Q2M2E3 257 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 TMEM244Q5VVB8 128 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 CD276Q5ZPR3 534 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 PLCXD3Q63HM9 321 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 ADAMTSL5Q6ZMM2 481 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 ZNF573Q86YE8 665 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 RDH10Q8IZV5 341 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 DHRSXQ8N5I4 330 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 OR4S1Q8NGB4 309 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 ANGPTL6Q8NI99 470 aa11.41□□□□□ -0.58
PTCH1-217ENST00000548420 MRPL48Q96GC5 212 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms