RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 TEX12Q9BXU0 123 aa9.64□□□□□ -0.87
TRAFD1-205ENST00000548277 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.64□□□□□ -0.87
TRAFD1-205ENST00000548277 GPR173Q9NS66 373 aa9.64□□□□□ -0.87
TRAFD1-205ENST00000548277 TVP23BQ9NYZ1 205 aa9.64□□□□□ -0.87
TRAFD1-205ENST00000548277 LAMP5Q9UJQ1 280 aa9.64□□□□□ -0.87
TRAFD1-205ENST00000548277 GTF2A1LQ9UNN4 478 aa9.64□□□□□ -0.87
TRAFD1-205ENST00000548277 TCF19Q9Y242 345 aa9.64□□□□□ -0.87
TRAFD1-205ENST00000548277 PIGLQ9Y2B2 252 aa9.64□□□□□ -0.87
TRAFD1-205ENST00000548277 TMEM269A0A1B0GVZ9 245 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 A6NDX4 124 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 K7EIL1 84 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 NXPH2O95156 264 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 NRASP01111 189 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 MRPL3P09001 348 aaKnown RBP9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 ALOX5APP20292 161 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 CRISP1P54107 249 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 EDDM3BP56851 147 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 PSMA6P60900 246 aaKnown RBP9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 ESRRGP62508 458 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 RIPPLY1Q0D2K3 151 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 LDLRAD2Q5SZI1 272 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 ASRGL1Q7L266 308 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 DTX3Q8N9I9 347 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 POC1AQ8NBT0 407 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 OR5AU1Q8NGC0 362 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 RPS4Y2Q8TD47 263 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 TEAD3Q99594 435 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 SLC25A19Q9HC21 320 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 GPR84Q9NQS5 396 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 RASL12Q9NYN1 266 aa9.63□□□□□ -0.87
TRAFD1-205ENST00000548277 FAM90A8PA6NJQ4 464 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 H3BSH0 61 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 TK1P04183 234 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 PF4V1P10720 104 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 CD24P25063 80 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 VDAC2P45880 294 aaPredicted RBP9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 DAPP51397 102 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 SLC34A1Q06495 639 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 SMIM21Q3B7S5 101 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 ZNF684Q5T5D7 378 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 CCDC121Q6ZUS5 278 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 CENPVQ7Z7K6 275 aaPredicted RBP9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 ANGPTL5Q86XS5 388 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 Q8N2B8 174 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 ASCC1Q8N9N2 400 aaKnown RBP9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 MALSU1Q96EH3 234 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 NRBF2Q96F24 287 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 OR8B4Q96RC9 309 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 CADM1Q9BY67 442 aaKnown RBP9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 YIPF3Q9GZM5 350 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 PBOV1Q9GZY1 135 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 PAPOLBQ9NRJ5 636 aaKnown RBP9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 FAM53CQ9NYF3 392 aa9.62□□□□□ -0.87
TRAFD1-205ENST00000548277 WI2-2373I1.2A0A1W2PRP0 233 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 TCRBV4S1A1TA0A5B7 111 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 CCDC182A6NF36 153 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 OR5B21A6NL26 309 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 C17orf98A8MV24 154 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 MAGEB4O15481 346 aaPredicted RBP9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 PF4P02776 101 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 OR12D2P58182 307 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 COL10A1Q03692 680 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 PTGES3Q15185 160 aaKnown RBP9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 FAHD1Q6P587 224 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 KCTD18Q6PI47 426 aaPredicted RBP9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 OR13D1Q8NGV5 346 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 NDNFQ8TB73 568 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 TRMT10AQ8TBZ6 339 aaKnown RBP9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 DNAJC9Q8WXX5 260 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 UTP4Q969X6 686 aaKnown RBP9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 MROQ9BYG7 248 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 WNT10AQ9GZT5 417 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 FAM206AQ9NX38 181 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 ENPP5Q9UJA9 477 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 PITPNC1Q9UKF7 332 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 IKZF2Q9UKS7 526 aa9.61□□□□□ -0.87
TRAFD1-205ENST00000548277 A0A0U1RQV5 110 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 ACOD1A6NK06 481 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 SH2D7A6NKC9 451 aaPredicted RBP9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 VGLL3A8MV65 326 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 PRR32B1ATL7 298 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 F2RL2O00254 374 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 PRKYO43930 277 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 MITFO75030 526 aaPredicted RBP9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 PGA5P0DJD9 388 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 HOXD3P31249 432 aaPredicted RBP9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 DLX6P56179 175 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 KRTAP10-11P60412 298 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 MFGE8Q08431 387 aaPredicted RBP9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 EDDM3AQ14507 147 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 KHDC1LQ5JSQ8 128 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 LCN1P1Q5VSP4 162 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 DEGS2Q6QHC5 323 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 PLEKHG7Q6ZR37 379 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 GDPD3Q7L5L3 318 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 BCDIN3DQ7Z5W3 292 aaKnown RBP9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 ZNF573Q86YE8 665 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 TPRX1Q8N7U7 411 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 WIPF2Q8TF74 440 aaPredicted RBP9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 OCSTAMPQ9BR26 566 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms