RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 OR10AD1Q8NGE0 317 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 OR51Q1Q8NH59 317 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 UBA3Q8TBC4 463 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 NT5CQ8TCD5 201 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 DNAJB3Q8WWF6 145 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 RXFP2Q8WXD0 754 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 PPWD1Q96BP3 646 aaKnown RBP3.1□□□□□ -1.91
SCAF11-210ENST00000547654 CMTM5Q96DZ9 223 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 RDH12Q96NR8 316 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 C20orf144Q9BQM9 153 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 ZNF426Q9BUY5 554 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 SLC25A2Q9BXI2 301 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 PSTPIP2Q9H939 334 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 ASCL3Q9NQ33 180 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 IL20Q9NYY1 176 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 HMGXB4Q9UGU5 601 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 SLC7A11Q9UPY5 501 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 HES2Q9Y543 173 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 UBIAD1Q9Y5Z9 338 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 USH1CQ9Y6N9 552 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 ELP1O95163 1332 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 ANKRD26Q9UPS8 1709 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 KDM3BQ7LBC6 1761 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 PPIP5K1Q6PFW1 1433 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 FASNP49327 2511 aaKnown RBP3.1□□□□□ -1.91
SCAF11-210ENST00000547654 A0A1W2PRG6 482 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 SLC5A10A0PJK1 596 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 SMIM23A6NLE4 172 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 TNFRSF11BO00300 401 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 TCAPO15273 167 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 CRXO43186 299 aaPredicted RBP3.09□□□□□ -1.91
SCAF11-210ENST00000547654 RAD1O60671 282 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 ATP5HO75947 161 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 HSPB1P04792 205 aaKnown RBP3.09□□□□□ -1.91
SCAF11-210ENST00000547654 CD3GP09693 182 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 ZDHHC11BP0C7U3 371 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 OCM2P0CE71 109 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 ZNF30P17039 623 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 PVALBP20472 110 aaPredicted RBP3.09□□□□□ -1.91
SCAF11-210ENST00000547654 MYCNOSP40205 109 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 ZNF138P52744 262 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 TAS2R46P59540 309 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 IL5RAQ01344 420 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 GINS1Q14691 196 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 PON2Q15165 354 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 PSG5Q15238 335 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 RGS21Q2M5E4 152 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 CDNFQ49AH0 187 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 OR10J3Q5JRS4 329 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 SYT6Q5T7P8 510 aaPredicted RBP3.09□□□□□ -1.91
SCAF11-210ENST00000547654 Q6ZT83 130 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 PRSS58Q8IYP2 241 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 METTL13Q8N6R0 699 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 C14orf178Q8N769 122 aaPredicted RBP3.09□□□□□ -1.91
SCAF11-210ENST00000547654 COX18Q8N8Q8 333 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 GPR26Q8NDV2 337 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 OR4K17Q8NGC6 315 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 OR5P2Q8WZ92 322 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 ZMYND19Q96E35 227 aaPredicted RBP3.09□□□□□ -1.91
SCAF11-210ENST00000547654 TMEM101Q96IK0 257 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 C1orf147Q96MC9 270 aaPredicted RBP3.09□□□□□ -1.91
SCAF11-210ENST00000547654 Q96MT0 163 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 SULT4A1Q9BR01 284 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 CCDC94Q9BW85 323 aaPredicted RBP3.09□□□□□ -1.91
SCAF11-210ENST00000547654 LRRC19Q9H756 370 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 ABCB9Q9NP78 766 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 EXOSC4Q9NPD3 245 aaKnown RBP3.09□□□□□ -1.91
SCAF11-210ENST00000547654 ZDHHC4Q9NPG8 344 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 RRAGDQ9NQL2 400 aaPredicted RBP3.09□□□□□ -1.91
SCAF11-210ENST00000547654 ASH1LQ9NR48 2969 aaKnown RBP3.09□□□□□ -1.91
SCAF11-210ENST00000547654 TREX1Q9NSU2 369 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 DNAJC27Q9NZQ0 273 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 NUFIP1Q9UHK0 495 aaKnown RBP3.09□□□□□ -1.91
SCAF11-210ENST00000547654 MOKQ9UQ07 419 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 ZNF257Q9Y2Q1 563 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 SIGLEC9Q9Y336 463 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 NFASCO94856 1347 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 RAD50Q92878 1312 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 LAMB1P07942 1786 aa3.09□□□□□ -1.91
SCAF11-210ENST00000547654 ANKRD31Q8N7Z5 1873 aa3.09□□□□□ -1.92
SCAF11-210ENST00000547654 GPR179Q6PRD1 2367 aa3.09□□□□□ -1.92
SCAF11-210ENST00000547654 NSD3Q9BZ95 1437 aa3.09□□□□□ -1.92
SCAF11-210ENST00000547654 A0A1B0GX12 115 aa3.08□□□□□ -1.92
SCAF11-210ENST00000547654 CDIPTO14735 213 aa3.08□□□□□ -1.92
SCAF11-210ENST00000547654 MYL12BO14950 172 aa3.08□□□□□ -1.92
SCAF11-210ENST00000547654 UBDO15205 165 aa3.08□□□□□ -1.92
SCAF11-210ENST00000547654 SHOX2O60902 331 aaPredicted RBP3.08□□□□□ -1.92
SCAF11-210ENST00000547654 GLSO94925 669 aaPredicted RBP3.08□□□□□ -1.92
SCAF11-210ENST00000547654 RAB36O95755 333 aa3.08□□□□□ -1.92
SCAF11-210ENST00000547654 CD8AP01732 235 aa3.08□□□□□ -1.92
SCAF11-210ENST00000547654 THY1P04216 161 aa3.08□□□□□ -1.92
SCAF11-210ENST00000547654 MMP7P09237 267 aaPredicted RBP3.08□□□□□ -1.92
SCAF11-210ENST00000547654 PSKH1P11801 424 aa3.08□□□□□ -1.92
SCAF11-210ENST00000547654 TDGF1P13385 188 aa3.08□□□□□ -1.92
SCAF11-210ENST00000547654 HTR1DP28221 377 aa3.08□□□□□ -1.92
SCAF11-210ENST00000547654 TALDO1P37837 337 aa3.08□□□□□ -1.92
SCAF11-210ENST00000547654 CDKN2BP42772 138 aa3.08□□□□□ -1.92
SCAF11-210ENST00000547654 RPL14P50914 215 aaKnown RBP3.08□□□□□ -1.92
SCAF11-210ENST00000547654 TDGF1P3P51864 188 aa3.08□□□□□ -1.92
SCAF11-210ENST00000547654 NDUFA8P51970 172 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms