RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PCED1AQ9H1Q7 454 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 NIT2Q9NQR4 276 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 PIGLQ9Y2B2 252 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 NSG1A0A0A6YYJ2 146 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 A0A1W2PNR3 127 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 A0A1W2PPE3 182 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 METTL12A8MUP2 240 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 ZNF814B7Z6K7 855 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 K7N7A8 449 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 ST8SIA3O43173 380 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 IFNA17P01571 189 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 OR5AC1P0C628 307 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 OR8U8P0C7N1 319 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 GABRR1P24046 479 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 CHATP28329 748 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 UCP3P55916 312 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 POLR2GP62487 172 aaKnown RBP eCLIP7.64□□□□□ -1.19
TDP1-204ENST00000545686 LCN10Q6JVE6 187 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 WDR74Q6RFH5 385 aaPredicted RBP7.64□□□□□ -1.19
TDP1-204ENST00000545686 SHISA6Q6ZSJ9 500 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 LGI3Q8N145 548 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 SLC22A8Q8TCC7 542 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 THAP3Q8WTV1 239 aaPredicted RBP7.64□□□□□ -1.19
TDP1-204ENST00000545686 RTN4IP1Q8WWV3 396 aaPredicted RBP7.64□□□□□ -1.19
TDP1-204ENST00000545686 TMEM54Q969K7 222 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 GNRHR2Q96P88 292 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 PIGQQ9BRB3 760 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 METTL9Q9H1A3 318 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 TMPRSS5Q9H3S3 457 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 UNKLQ9H9P5 680 aaKnown RBP7.64□□□□□ -1.19
TDP1-204ENST00000545686 ELL3Q9HB65 397 aaPredicted RBP7.64□□□□□ -1.19
TDP1-204ENST00000545686 WFDC1Q9HC57 220 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 XIRP2A4UGR9 3374 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 BTBD17A6NE02 478 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 MSTNO14793 375 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 PRH1P02810 166 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 CBR1P16152 277 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 CSNK1A1P48729 337 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 NXPH1P58417 271 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 SRPXP78539 464 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 ENDOGQ14249 297 aaKnown RBP7.63□□□□□ -1.19
TDP1-204ENST00000545686 FAM209BQ5JX69 171 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 LINC00469Q8N7U9 141 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 FADS6Q8N9I5 356 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 CCDC71LQ8N9Z2 235 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 TSTD1Q8NFU3 115 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 PIGTQ969N2 578 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 SPTSSAQ969W0 71 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 YPEL4Q96NS1 127 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 WDR77Q9BQA1 342 aaPredicted RBP7.63□□□□□ -1.19
TDP1-204ENST00000545686 SYT3Q9BQG1 590 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 TMED3Q9Y3Q3 217 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 TNRC6BQ9UPQ9 1833 aaKnown RBP7.63□□□□□ -1.19
TDP1-204ENST00000545686 hCG_1809904A0A1W2PP81 198 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 A0A1W2PR64 198 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 A0A1W2PRV1 198 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 C5orf63A6NC05 138 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 ZNF850A8MQ14 1090 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 M0R135 149 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 CLN5O75503 358 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 PIAS2O75928 621 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 ZFAND5O76080 213 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 GLB1P16278 677 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 CLDN17P56750 224 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 CNN3Q15417 329 aaKnown RBP7.63□□□□□ -1.19
TDP1-204ENST00000545686 FBXW12Q6X9E4 464 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 ASCL4Q6XD76 172 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 OR10G3Q8NGC4 313 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 RLN3Q8WXF3 142 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 ISOC2Q96AB3 205 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 NABP1Q96AH0 204 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 ZNF799Q96GE5 643 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 HDHD3Q9BSH5 251 aaPredicted RBP7.63□□□□□ -1.19
TDP1-204ENST00000545686 LIME1Q9H400 295 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 SLC2A9Q9NRM0 540 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 MYOTQ9UBF9 498 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 AK3Q9UIJ7 227 aa7.63□□□□□ -1.19
TDP1-204ENST00000545686 A0A087WZY1 265 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 F5H5K5 113 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 TOX3O15405 576 aaPredicted RBP7.62□□□□□ -1.19
TDP1-204ENST00000545686 RAMP1O60894 148 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 CDS2O95674 445 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 IGHV2-70P01814 119 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 ZNF266Q14584 549 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 RSU1Q15404 277 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 SHHQ15465 462 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 OR8B8Q15620 311 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 HEPN1Q6WQI6 88 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 FAM24BQ8N5W8 94 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 ZNF565Q8N9K5 539 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 CADM4Q8NFZ8 388 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 MOB3AQ96BX8 217 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 MSI2Q96DH6 328 aaKnown RBP7.62□□□□□ -1.19
TDP1-204ENST00000545686 BSCL2Q96G97 398 aaPredicted RBP7.62□□□□□ -1.19
TDP1-204ENST00000545686 MARS2Q96GW9 593 aaKnown RBP7.62□□□□□ -1.19
TDP1-204ENST00000545686 ABHD14BQ96IU4 210 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 MESP1Q9BRJ9 268 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 PARP12Q9H0J9 701 aaKnown RBP7.62□□□□□ -1.19
TDP1-204ENST00000545686 MIOXQ9UGB7 285 aa7.62□□□□□ -1.19
TDP1-204ENST00000545686 TCFL5Q9UL49 500 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms