RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 H3BNX3 289 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 F2RL2O00254 374 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 EI24O14681 340 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 SULT1C4O75897 302 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 KRT8P05787 483 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 SFTPBP07988 381 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 OR2T7P0C7T2 308 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 CCL1P22362 96 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 CDC42P60953 191 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 BAMBIQ13145 260 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 KPNB1Q14974 876 aaKnown RBP6.33□□□□□ -1.4
SNHG1-223ENST00000545440 LRRC10Q5BKY1 277 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 KIAA2026Q5HYC2 2103 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 CEP78Q5JTW2 689 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 PLCXD3Q63HM9 321 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 TMEM42Q69YG0 159 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 Q6ZSR3 168 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 BTN2A1Q7KYR7 527 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 ELMOD2Q8IZ81 293 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 KIR3DL3Q8N743 410 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 FAM216BQ8N7L0 139 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 OR5A2Q8NGI9 324 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 OR2T27Q8NH04 317 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 C8orf46Q8TAG6 207 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 TRUB1Q8WWH5 349 aaKnown RBP6.33□□□□□ -1.4
SNHG1-223ENST00000545440 ST8SIA4Q92187 359 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 SLC25A28Q96A46 364 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 FAM71F1Q96KD3 344 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-223ENST00000545440 WDFY2Q96P53 400 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 TBX15Q96SF7 602 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 APOL4Q9BPW4 351 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 PCGF1Q9BSM1 259 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 SIRPDQ9H106 197 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 WDR13Q9H1Z4 485 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 OR51I2Q9H344 312 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 PRDM13Q9H4Q3 707 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 IMPAD1Q9NX62 359 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 FAM30AQ9NZY2 134 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 MRM2Q9UI43 246 aaKnown RBP6.33□□□□□ -1.4
SNHG1-223ENST00000545440 OR52A1Q9UKL2 312 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.33□□□□□ -1.4
SNHG1-223ENST00000545440 GTF2A1LQ9UNN4 478 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 PIGLQ9Y2B2 252 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 ORC6Q9Y5N6 252 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 KPTNQ9Y664 436 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 V9GYS6 101 aa6.33□□□□□ -1.4
SNHG1-223ENST00000545440 LOC100996750A0A140TA64 210 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 A0A1B0GW55 424 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 A0A1W2PQL4 384 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-223ENST00000545440 OR2AT4A6NND4 320 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 E9PQ18 207 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 J3QT63 122 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 DLGAP1O14490 977 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 SIGLEC5O15389 551 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 AKR7A2O43488 359 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 NDUFB3O43676 98 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 RHBDL1O75783 438 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 NRASP01111 189 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 DUX4L2P0CJ85 424 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 DUX4L3P0CJ86 424 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 DUX4L4P0CJ87 422 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 DUX4L5P0CJ88 424 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 DUX4L6P0CJ89 424 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 DUX4L7P0CJ90 424 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 HKR1P10072 659 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 GLRA1P23415 457 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 POLR2IP36954 125 aaKnown RBP6.32□□□□□ -1.4
SNHG1-223ENST00000545440 TGM4P49221 684 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 ALDH3A2P51648 485 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 CAV3P56539 151 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 ACTC1P68032 377 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 ACTA1P68133 377 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 FOXL1Q12952 345 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 SMIM21Q3B7S5 101 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 CDONQ4KMG0 1287 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 AWAT1Q58HT5 328 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 SLC25A30Q5SVS4 291 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 CLVS2Q5SYC1 327 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 ZNF684Q5T5D7 378 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 HAGHLQ6PII5 290 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-223ENST00000545440 DUX4L9Q6RFH8 374 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-223ENST00000545440 METAP1DQ6UB28 335 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-223ENST00000545440 BRD3OSQ6XYD6 125 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 ZNF788Q6ZQV5 615 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 PLEKHG7Q6ZR37 379 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 SSX6Q7RTT6 188 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 FAM220AQ7Z4H9 259 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 ZNF573Q86YE8 665 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 C10orf67Q8IYJ2 551 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 YIPF7Q8N8F6 280 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 LY6G5BQ8NDX9 201 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 CCDC54Q8NEL0 328 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 OR10H4Q8NGA5 316 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 ANGPTL6Q8NI99 470 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 ZNF671Q8TAW3 534 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 AQP3Q92482 292 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 EME1Q96AY2 570 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 TMIGD2Q96BF3 282 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 SEH1LQ96EE3 360 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 GAFA1Q96PS6 74 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms