RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 TEAD3Q99594 435 aa10.31□□□□□ -0.76
USP28-212ENST00000544750 TEX12Q9BXU0 123 aa10.31□□□□□ -0.76
USP28-212ENST00000544750 S100A14Q9HCY8 104 aa10.31□□□□□ -0.76
USP28-212ENST00000544750 USE1Q9NZ43 259 aa10.31□□□□□ -0.76
USP28-212ENST00000544750 LYSTQ99698 3801 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 HUWE1Q7Z6Z7 4374 aaKnown RBP10.3□□□□□ -0.76
USP28-212ENST00000544750 ZNF850A8MQ14 1090 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 ODF3BA8MYP8 253 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 EI24O14681 340 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 DUS4LO95620 317 aaKnown RBP10.3□□□□□ -0.76
USP28-212ENST00000544750 ANXA2P07355 339 aaKnown RBP10.3□□□□□ -0.76
USP28-212ENST00000544750 LYNP07948 512 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 ALOX5APP20292 161 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 SLC15A1P46059 708 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 DYNLT3P51808 116 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 HCCSP53701 268 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 LGALS4P56470 323 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 ZNF121P58317 390 aaPredicted RBP10.3□□□□□ -0.76
USP28-212ENST00000544750 RPS7P62081 194 aaKnown RBP10.3□□□□□ -0.76
USP28-212ENST00000544750 SNCBQ16143 134 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 NXNL2Q5VZ03 156 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 TMEM200BQ69YZ2 307 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 FAM57BQ71RH2 274 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 OR5AU1Q8NGC0 362 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 OR52H1Q8NGJ2 320 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 PRRG3Q9BZD7 231 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 RIBC2Q9H4K1 309 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 ABCB9Q9NP78 766 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 INPP5EQ9NRR6 644 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 ENOPH1Q9UHY7 261 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 COPS3Q9UNS2 423 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 STAB2Q8WWQ8 2551 aa10.3□□□□□ -0.76
USP28-212ENST00000544750 A0A1W2PRX2 142 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 SYNGR1O43759 233 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 MTRF1O75570 445 aaKnown RBP10.29□□□□□ -0.76
USP28-212ENST00000544750 MRPL3P09001 348 aaKnown RBP10.29□□□□□ -0.76
USP28-212ENST00000544750 PF4V1P10720 104 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 CCL3L1P16619 93 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 COX7A1P24310 79 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 VDAC2P45880 294 aaPredicted RBP10.29□□□□□ -0.76
USP28-212ENST00000544750 DLX6P56179 175 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 ZNF273Q14593 569 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 PLA1AQ53H76 456 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 LCN1P1Q5VSP4 162 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 MEPCEQ7L2J0 689 aaKnown RBP10.29□□□□□ -0.76
USP28-212ENST00000544750 PQLC1Q8N2U9 271 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 ZNF454Q8N9F8 522 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 RPS4Y2Q8TD47 263 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 THEM6Q8WUY1 208 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 MALSU1Q96EH3 234 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 RNF170Q96K19 258 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 LYZL4Q96KX0 146 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 IL4I1Q96RQ9 567 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 YIPF3Q9GZM5 350 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 OR51I2Q9H344 312 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 RGCCQ9H4X1 137 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 ADGRL4Q9HBW9 690 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 DNAJC27Q9NZQ0 273 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 PITPNC1Q9UKF7 332 aa10.29□□□□□ -0.76
USP28-212ENST00000544750 TBL2Q9Y4P3 447 aaKnown RBP10.29□□□□□ -0.76
USP28-212ENST00000544750 TENM2Q9NT68 2774 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 C17orf98A8MV24 154 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 PEX14O75381 377 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 APOC1P02654 83 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 H2BFMP0C1H6 154 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 HSD11B1P28845 292 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 HOXD3P31249 432 aaPredicted RBP10.28□□□□□ -0.76
USP28-212ENST00000544750 ALDH3A2P51648 485 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 RPL31P62899 125 aaKnown RBP10.28□□□□□ -0.76
USP28-212ENST00000544750 GFOD2Q3B7J2 385 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 ZNF626Q68DY1 528 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 THAP5Q7Z6K1 395 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 CALHM1Q8IU99 346 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 FTMTQ8N4E7 242 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 CBR4Q8N4T8 237 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 CD177Q8N6Q3 437 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 PIGCQ92535 297 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 FOXRED1Q96CU9 486 aaPredicted RBP10.28□□□□□ -0.76
USP28-212ENST00000544750 MBOAT4Q96T53 435 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 SLC29A1Q99808 456 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 OR10A2Q9H208 303 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 DNAH1Q9P2D7 4330 aa10.28□□□□□ -0.76
USP28-212ENST00000544750 FAM90A22PA8MWA6 464 aa10.27□□□□□ -0.77
USP28-212ENST00000544750 PSMD9O00233 223 aa10.27□□□□□ -0.77
USP28-212ENST00000544750 PF4P02776 101 aa10.27□□□□□ -0.77
USP28-212ENST00000544750 JUNBP17275 347 aaPredicted RBP10.27□□□□□ -0.77
USP28-212ENST00000544750 GPM6AP51674 278 aa10.27□□□□□ -0.77
USP28-212ENST00000544750 PSMA6P60900 246 aaKnown RBP10.27□□□□□ -0.77
USP28-212ENST00000544750 SSX2Q16385 188 aa10.27□□□□□ -0.77
USP28-212ENST00000544750 ZNF782Q6ZMW2 699 aaPredicted RBP10.27□□□□□ -0.77
USP28-212ENST00000544750 ACP7Q6ZNF0 438 aa10.27□□□□□ -0.77
USP28-212ENST00000544750 KCTD8Q6ZWB6 473 aa10.27□□□□□ -0.77
USP28-212ENST00000544750 GID4Q8IVV7 300 aa10.27□□□□□ -0.77
USP28-212ENST00000544750 ZDHHC23Q8IYP9 409 aa10.27□□□□□ -0.77
USP28-212ENST00000544750 LINC00482Q8N8I6 264 aa10.27□□□□□ -0.77
USP28-212ENST00000544750 OR11H6Q8NGC7 330 aa10.27□□□□□ -0.77
USP28-212ENST00000544750 AQP3Q92482 292 aa10.27□□□□□ -0.77
USP28-212ENST00000544750 HRASLS5Q96KN8 279 aa10.27□□□□□ -0.77
USP28-212ENST00000544750 CNN2Q99439 309 aaKnown RBP10.27□□□□□ -0.77
USP28-212ENST00000544750 TTTY10Q9BZA0 68 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms